U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    TLR5 toll like receptor 5 [ Strigops habroptila (Kakapo) ]

    Gene ID: 115614025, updated on 17-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TLR5
    Gene description
    toll like receptor 5
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strigops habroptila
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittacidae; Strigops
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TLR5 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current bStrHab1.2.pri (GCF_004027225.2) 10 NC_046359.1 (36163313..36170645)
    100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 10 NC_044286.1 (36163313..36170645)

    Chromosome 10 - NC_046359.1Genomic Context describing neighboring genes Neighboring gene calpain-8-like Neighboring gene sushi domain containing 4 Neighboring gene dispatched RND transporter family member 1 Neighboring gene BRO1 domain and CAAX motif containing

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in toll-like receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    toll-like receptor 5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bStrHab1.2.pri

    Genomic

    1. NC_046359.1 Reference bStrHab1.2.pri

      Range
      36163313..36170645
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030500251.1 → XP_030356111.1  toll-like receptor 5

      UniProtKB/TrEMBL
      A0A672V8Z1
      Conserved Domains (5) summary
      TIGR00864
      Location:556 → 634
      PCC; polycystin cation channel protein
      smart00255
      Location:694 → 829
      TIR; Toll - interleukin 1 - resistance
      PLN00113
      Location:116 → 581
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:292 → 315
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:505 → 562
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.