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    TUT7 terminal uridylyl transferase 7 [ Tyto alba (common barn owl) ]

    Gene ID: 104367910, updated on 3-Aug-2024

    Summary

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    Gene symbol
    TUT7
    Gene description
    terminal uridylyl transferase 7
    Locus tag
    N341_07205
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tyto alba
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
    Also known as
    ZCCHC6
    Orthologs
    human mouse all
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    Genomic context

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    See TUT7 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881275.1 (35837054..35873592, complement)
    100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_009976258.1 (4450..29265, complement)

    NW_024881275.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116958905 Neighboring gene iron-sulfur cluster assembly 1 Neighboring gene growth arrest specific 1 Neighboring gene death associated protein kinase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA uridylyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA 3' uridylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    terminal uridylyltransferase 7
    Names
    Terminal uridylyltransferase 7
    zinc finger CCHC-type containing 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T.alba_DEE_v4.0

    Genomic

    1. NW_024881275.1 Reference T.alba_DEE_v4.0

      Range
      35837054..35873592 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042787574.1 → XP_042643508.1  terminal uridylyltransferase 7 isoform X1

      UniProtKB/TrEMBL
      A0A093ESK3
      Conserved Domains (3) summary
      cd05402
      Location:1022 → 1139
      NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
      PTZ00368
      Location:1341 → 1486
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      COG5260
      Location:1001 → 1311
      TRF4; DNA polymerase sigma [Replication, recombination and repair]

    2. XM_042787576.1 → XP_042643510.1  terminal uridylyltransferase 7 isoform X1

      UniProtKB/TrEMBL
      A0A093ESK3
      Conserved Domains (3) summary
      cd05402
      Location:1022 → 1139
      NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
      PTZ00368
      Location:1341 → 1486
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      COG5260
      Location:1001 → 1311
      TRF4; DNA polymerase sigma [Replication, recombination and repair]

    3. XM_042787577.1 → XP_042643511.1  terminal uridylyltransferase 7 isoform X3

      UniProtKB/TrEMBL
      A0A093ESK3
      Conserved Domains (3) summary
      cd05402
      Location:987 → 1104
      NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
      PTZ00368
      Location:1306 → 1451
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      COG5260
      Location:966 → 1276
      TRF4; DNA polymerase sigma [Replication, recombination and repair]

    4. XM_042787575.1 → XP_042643509.1  terminal uridylyltransferase 7 isoform X1

      UniProtKB/TrEMBL
      A0A093ESK3
      Conserved Domains (3) summary
      cd05402
      Location:1022 → 1139
      NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
      PTZ00368
      Location:1341 → 1486
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      COG5260
      Location:1001 → 1311
      TRF4; DNA polymerase sigma [Replication, recombination and repair]

    5. XM_032981802.2 → XP_032837693.1  terminal uridylyltransferase 7 isoform X4

      UniProtKB/TrEMBL
      A0A093ESK3
      Conserved Domains (7) summary
      cd05402
      Location:1022 → 1139
      NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
      PTZ00368
      Location:1444 → 1496
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      smart00343
      Location:1453 → 1469
      ZnF_C2HC; zinc finger
      COG5260
      Location:1001 → 1311
      TRF4; DNA polymerase sigma [Replication, recombination and repair]
      pfam03828
      Location:535 → 582
      PAP_assoc; Cid1 family poly A polymerase
      pfam16631
      Location:1364 → 1451
      TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
      pfam19088
      Location:195 → 522
      TUTase; TUTase nucleotidyltransferase domain

    6. XM_032981801.2 → XP_032837692.1  terminal uridylyltransferase 7 isoform X2

      UniProtKB/TrEMBL
      A0A093ESK3
      Conserved Domains (7) summary
      cd05402
      Location:1022 → 1139
      NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
      PTZ00368
      Location:1444 → 1496
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      smart00343
      Location:1453 → 1469
      ZnF_C2HC; zinc finger
      COG5260
      Location:1001 → 1311
      TRF4; DNA polymerase sigma [Replication, recombination and repair]
      pfam03828
      Location:535 → 582
      PAP_assoc; Cid1 family poly A polymerase
      pfam16631
      Location:1364 → 1451
      TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
      pfam19088
      Location:195 → 522
      TUTase; TUTase nucleotidyltransferase domain
    Nucleotide Protein
    Heading Accession and Version

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