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    EVPL envoplakin [ Nipponia nippon (crested ibis) ]

    Gene ID: 104022844, updated on 3-Aug-2024

    Summary

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    Gene symbol
    EVPL
    Gene description
    envoplakin
    Locus tag
    Y956_05005
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nipponia nippon
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
    Orthologs
    human mouse all
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    Genomic context

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    See EVPL in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_008998821.1 (1487661..1513264)

    NW_008998821.1Genomic Context describing neighboring genes Neighboring gene galanin receptor 2 Neighboring gene signal recognition particle 68 Neighboring gene cyclin dependent kinase 3 Neighboring gene TEN1 subunit of CST complex

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008998821.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cadherin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intermediate filament cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in wound healing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intermediate filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    envoplakin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM70822v1 Primary Assembly

    Genomic

    1. NW_008998821.1 Reference ASM70822v1 Primary Assembly

      Range
      1487661..1513264
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009476605.1 → XP_009474880.1  envoplakin

      UniProtKB/TrEMBL
      A0A091UPP8
      Conserved Domains (6) summary
      smart00250
      Location:1889 → 1926
      PLEC; Plectin repeat
      cd00176
      Location:219 → 393
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      TIGR02169
      Location:1045 → 1696
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      TIGR04523
      Location:605 → 1352
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      pfam00681
      Location:1852 → 1893
      Plectin; Plectin repeat
      pfam00901
      Location:860 → 1014
      Orbi_VP5; Orbivirus outer capsid protein VP5
    Nucleotide Protein
    Heading Accession and Version

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