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    PAXIP1 PAX interacting protein 1 [ Chrysemys picta bellii (western painted turtle) ]

    Gene ID: 101933978, updated on 6-Jun-2024

    Summary

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    Gene symbol
    PAXIP1
    Gene description
    PAX interacting protein 1
    See related
    Ensembl:ENSCPBG00000018227
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chrysemys picta bellii (sub-species: bellii)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
    Orthologs
    human mouse all
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    Genomic context

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    See PAXIP1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 2 NC_088792.1 (20161655..20247553, complement)
    102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007359874.1 (22835098..22925156)

    Chromosome 2 - NC_088792.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135981258 Neighboring gene small nucleolar RNA SNORA5 Neighboring gene dipeptidyl peptidase like 6 Neighboring gene uncharacterized LOC135981259 Neighboring gene 5-hydroxytryptamine receptor 5A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in positive regulation of transcription initiation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PAX-interacting protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1138683v2

    Genomic

    1. NC_088792.1 Reference ASM1138683v2

      Range
      20161655..20247553 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005297195.5 → XP_005297252.2  PAX-interacting protein 1 isoform X2

    2. XM_065582728.1 → XP_065438800.1  PAX-interacting protein 1 isoform X1

    3. XM_065582729.1 → XP_065438801.1  PAX-interacting protein 1 isoform X3

    RNA

    1. XR_010598204.1 RNA Sequence

    2. XR_010598205.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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