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    PN99_s2gp1 RNA-dependent RNA polymerase [ Lilac leaf chlorosis virus ]

    Gene ID: 22203882, updated on 16-Aug-2018

    Summary

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    Gene symbol
    PN99_s2gp1
    Gene description
    RNA-dependent RNA polymerase
    Locus tag
    PN99_s2gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Lilac leaf chlorosis virus (nat-host: Syringa vulgaris)
    Lineage
    Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae; Ilarvirus
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    Genomic context

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    Location:
    segment: RNA 2
    Sequence:
    NC_025478.1 (139..2562)

    NC_025478.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_025478.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence analysis of RNA 2 and RNA 3 of lilac leaf chlorosis virus: a putative new member of the genus Ilarvirus. James D, et al. Arch Virol, 2010 Jun. PMID 20432048

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    3'UTR

    • Loc: 1925-2117

    General protein information

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    Preferred Names
    RNA-dependent RNA polymerase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_025478.1 Reference assembly

      Range
      139..2562
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009104368.1 RNA-dependent RNA polymerase [Lilac leaf chlorosis virus]

      See identical proteins and their annotated locations for YP_009104368.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D6CHU1
      Conserved Domains (1) summary
      pfam00978
      Location:327 → 760
      RdRP_2; RNA dependent RNA polymerase
    Nucleotide Protein
    Heading Accession and Version

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