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    LOC4332328 uncharacterized LOC4332328 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4332328, updated on 1-Aug-2024

    Summary

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    Gene symbol
    LOC4332328
    Gene description
    uncharacterized LOC4332328
    Locus tag
    OSNPB_030262500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Ubiquitous expression in roots after flowering (RPKM 14.8), leaves before flowering (RPKM 14.3) and 6 other tissues See more
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    Genomic context

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    See LOC4332328 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (8654160..8659298, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (8603943..8609126, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4332326 Neighboring gene eukaryotic translation initiation factor NCBP-like Neighboring gene uncharacterized LOC4332329 Neighboring gene vacuolar protein sorting-associated protein 9A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4332328
    Names
    Os03g0262500

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      8654160..8659298 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066308738.1 → XP_066164835.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    2. XM_015776368.3 → XP_015631854.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    3. XM_015776388.3 → XP_015631874.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    4. XM_015776380.3 → XP_015631866.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    5. XM_015776387.3 → XP_015631873.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    6. XM_066308747.1 → XP_066164844.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    7. XM_066308743.1 → XP_066164840.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    8. XM_015776386.3 → XP_015631872.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    9. XM_066308745.1 → XP_066164842.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    10. XM_066308742.1 → XP_066164839.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    11. XM_015776384.3 → XP_015631870.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    12. XM_066308739.1 → XP_066164836.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    13. XM_026024000.2 → XP_025879785.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    14. XM_015776374.3 → XP_015631860.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    15. XM_015776379.3 → XP_015631865.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    16. XM_015776376.3 → XP_015631862.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    17. XM_015776366.3 → XP_015631852.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    18. XM_015776365.3 → XP_015631851.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    19. XM_066308749.1 → XP_066164846.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    20. XM_066308748.1 → XP_066164845.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    21. XM_066308744.1 → XP_066164841.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    22. XM_026024001.2 → XP_025879786.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    23. XM_066308740.1 → XP_066164837.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    24. XM_015776377.3 → XP_015631863.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    25. XM_015776375.3 → XP_015631861.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8

    26. XM_066308746.1 → XP_066164843.1  uncharacterized protein LOC4332328

      UniProtKB/TrEMBL
      Q10NQ8
    Nucleotide Protein
    Heading Accession and Version

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