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    LOC4336755 mechanosensitive ion channel protein 1, mitochondrial [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4336755, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4336755
    Gene description
    mechanosensitive ion channel protein 1, mitochondrial
    Locus tag
    OSNPB_040578700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4336755 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (29693266..29699765)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (29187061..29193584)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107276646 Neighboring gene ferric reduction oxidase 2-like Neighboring gene uncharacterized LOC4336756 Neighboring gene uncharacterized LOC136356235

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mechanosensitive ion channel protein 1, mitochondrial
    Names
    Os04g0578700

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      29693266..29699765
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015780890.2 → XP_015636376.1  mechanosensitive ion channel protein 1, mitochondrial

      UniProtKB/TrEMBL
      A0A0P0WDR2, B8ATA7, Q01KI1, Q0JAT1
      Conserved Domains (1) summary
      cl39057
      Location:313 → 516
      MS_channel; Mechanosensitive ion channel
    Nucleotide Protein
    Heading Accession and Version

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