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    ndhF NADH-plastoquinone oxidoreductase subunit 5 [ Pogonatherum paniceum ]

    Gene ID: 27217373, updated on 6-Aug-2016

    Summary

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    Gene symbol
    ndhF
    Gene description
    NADH-plastoquinone oxidoreductase subunit 5
    Locus tag
    A5459_gp017
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pogonatherum paniceum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Andropogoneae incertae sedis; Pogonatherum
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    Genomic context

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    Sequence:
    NC_029881.1 (104565..106781, complement)

    NC_029881.1Genomic Context describing neighboring genes Neighboring gene tRNA-Asn Neighboring gene ribosomal protein S15 Neighboring gene ribosomal protein L32 Neighboring gene tRNA-Leu

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029881.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multilocus phylogeny and phylogenomics of Eriochrysis P. Beauv. (Poaceae-Andropogoneae): Taxonomic implications and evidence of interspecific hybridization. Welker CAD, et al. Mol Phylogenet Evol, 2016 Jun. PMID 26947710

    GeneRIFs: Gene References Into Functions

    General protein information

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    Names
    NADH-plastoquinone oxidoreductase subunit 5

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_029881.1 Reference assembly

      Range
      104565..106781 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009245215.1 NADH-plastoquinone oxidoreductase subunit 5 (chloroplast) [Pogonatherum paniceum]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A142K0Z3
      Conserved Domains (4) summary
      CHL00025
      Location:1 → 737
      ndhF; NADH dehydrogenase subunit 5
      pfam00361
      Location:141 → 440
      Proton_antipo_M; Proton-conducting membrane transporter
      pfam00662
      Location:72 → 129
      Proton_antipo_N; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
      pfam01010
      Location:448 → 689
      Proton_antipo_C; NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
    Nucleotide Protein
    Heading Accession and Version