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    Hr38 Hormone receptor-like in 38 [ Apis cerana (Asiatic honeybee) ]

    Gene ID: 108000193, updated on 6-Jun-2024

    Summary

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    Gene symbol
    Hr38
    Gene description
    Hormone receptor-like in 38
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis cerana
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Orthologs
    fruit fly all
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    Genomic context

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    See Hr38 in Genome Data Viewer
    Location:
    chromosome: LG13
    Exon count:
    10
    Annotation release Status Assembly LG Location
    RS_2023_12 current AcerK_1.0 (GCF_029169275.1) LG13 NC_083864.1 (5812984..5854224)
    101 previous assembly ACSNU-2.0 (GCF_001442555.1) Unplaced Scaffold NW_016019430.1 (84160..122010, complement)

    Linkage Group LG13 - NC_083864.1Genomic Context describing neighboring genes Neighboring gene Nfs1 cysteine desulfurase Neighboring gene RAS oncogene family member RabX6 Neighboring gene COP9 signalosome subunit 8 Neighboring gene Importin subunit beta Fs(2)Ket Neighboring gene carcinine transporter

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear glucocorticoid receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to corticotropin-releasing hormone stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear receptor subfamily 4 group A member 2; probable nuclear hormone receptor HR38

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029169275.1-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AcerK_1.0 Primary Assembly

    Genomic

    1. NC_083864.1 Reference AcerK_1.0 Primary Assembly

      Range
      5812984..5854224
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017060407.3 → XP_016915896.1  nuclear receptor subfamily 4 group A member 2 isoform X2

      UniProtKB/TrEMBL
      A0A2A3E826

    2. XM_017060406.3 → XP_016915895.1  nuclear receptor subfamily 4 group A member 2 isoform X1

      UniProtKB/TrEMBL
      A0A2A3E826

    3. XM_017060409.3 → XP_016915898.1  nuclear receptor subfamily 4 group A member 2 isoform X3

      UniProtKB/TrEMBL
      A0A2A3E826

    4. XM_062083823.1 → XP_061939807.1  probable nuclear hormone receptor HR38 isoform X5

      UniProtKB/TrEMBL
      A0A2A3E826

    5. XM_062083824.1 → XP_061939808.1  probable nuclear hormone receptor HR38 isoform X5

      UniProtKB/TrEMBL
      A0A2A3E826

    6. XM_028667847.2 → XP_028523648.1  probable nuclear hormone receptor HR38 isoform X4

      UniProtKB/TrEMBL
      A0A2A3E826
      Conserved Domains (2) summary
      cd07072
      Location:478 → 712
      NR_LBD_DHR38_like; Ligand binding domain of DHR38_like proteins, members of the nuclear receptor superfamily
      cd06969
      Location:376 → 450
      NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B
    Nucleotide Protein
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