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    ttyh1.S tweety family member 1 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 444603, updated on 3-Jul-2024

    Summary

    Official Symbol
    ttyh1.S
    Official Full Name
    tweety family member 1 S homeolog
    Primary source
    Xenbase:XB-GENE-17339952
    Locus tag
    XELAEV_18037810mg
    See related
    EnsemblRapid:ENSXLAG00005012318
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    ttyh1-B
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    Genomic context

    See ttyh1.S in Genome Data Viewer
    Location:
    chromosome: 7S
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (98049427..98137454)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (78908491..78996525)

    Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin superfamily member 1 Neighboring gene Ig-like receptor 2 S homeolog Neighboring gene leukocyte receptor cluster (LRC) member 8 S homeolog Neighboring gene provisional ortholog of CDC42 effector protein 4 S homeolog

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Clone Names

    • MGC84077

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables chloride channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables volume-sensitive chloride channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within L-glutamate transmembrane transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within chloride transport IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of chloride channel complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    protein tweety homolog 1-B
    Names
    volume-regulated anion channel subunit ttyh1-b

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001092705.1NP_001086174.1  protein tweety homolog 1-B

      See identical proteins and their annotated locations for NP_001086174.1

      Status: PROVISIONAL

      Source sequence(s)
      BC074289
      UniProtKB/Swiss-Prot
      Q6GM04
      UniProtKB/TrEMBL
      A0A974CCQ6
      Related
      ENSXLAP00005036123.1, ENSXLAT00005037023.1
      Conserved Domains (1) summary
      pfam04906
      Location:26423
      Tweety; Tweety

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      98049427..98137454
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018226929.2XP_018082418.1  protein tweety homolog 1-B isoform X1

      UniProtKB/TrEMBL
      A0A8J0TEC6, A0A974CGS7
      Related
      ENSXLAP00005036116.1, ENSXLAT00005037016.1