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    APLP2 amyloid beta precursor like protein 2 [ Nanorana parkeri ]

    Gene ID: 108800342, updated on 14-Mar-2024

    Summary

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    Gene symbol
    APLP2
    Gene description
    amyloid beta precursor like protein 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nanorana parkeri
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Dicroglossidae; Dicroglossinae; Nanorana
    Orthologs
    human mouse all
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    Genomic context

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    See APLP2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current ASM93562v1 (GCF_000935625.1) Unplaced Scaffold NW_017308266.1 (185500..237402, complement)

    NW_017308266.1Genomic Context describing neighboring genes Neighboring gene nuclear factor related to kappaB binding protein Neighboring gene ST14 transmembrane serine protease matriptase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017308266.1 Unplaced Scaffold Reference ASM93562v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heparin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables serine-type endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transition metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axonogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in central nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    amyloid-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nanorana parkeri Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM93562v1 Primary Assembly

    Genomic

    1. NW_017308266.1 Reference ASM93562v1 Primary Assembly

      Range
      185500..237402 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018572326.1 → XP_018427828.1  amyloid-like protein 2 isoform X1

    2. XM_018572327.1 → XP_018427829.1  amyloid-like protein 2 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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