U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    TEOVI_000708700 DNA-directed RNA polymerase III largest subunit, putative [ Trypanosoma equiperdum ]

    Gene ID: 92381021, updated on 21-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TEOVI_000708700
    Gene description
    DNA-directed RNA polymerase III largest subunit, putative
    Locus tag
    TEOVI_000708700
    See related
    TriTrypDB:TEOVI_000708700; VEuPathDB:TEOVI_000708700
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trypanosoma equiperdum (strain: OVI, specimen-voucher: horse)
    Lineage
    Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TEOVI_000708700 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_027123543.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene protein phosphatase 1 Neighboring gene calreticulin, putative

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_027123543.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase II, core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    DNA-directed RNA polymerase III largest subunit, putative
    Names
    DNA-directed RNA polymerase III subunit C1
    RNA polymerase IIA largest subunit
    RNA polymerase IIA largest subunit, putative
    XP_067078074.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_027123543.1 Reference assembly

      Range
      6136..11433
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_067221973.1 → XP_067078074.1  DNA-directed RNA polymerase III largest subunit, putative [Trypanosoma equiperdum]

      Status: PROVISIONAL

    Nucleotide Protein
    Heading Accession and Version