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    PLCB2 phospholipase C beta 2 [ Odocoileus virginianus (white-tailed deer) ]

    Gene ID: 110124038, updated on 15-Mar-2024

    Summary

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    Gene symbol
    PLCB2
    Gene description
    phospholipase C beta 2
    See related
    EnsemblRapid:ENSOVIG00010004854
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Odocoileus virginianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
    Orthologs
    human mouse all
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    Genomic context

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    See PLCB2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018338364.1 (687331..708981)

    NW_018338364.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 9B Neighboring gene InaF motif containing 2 Neighboring gene ankyrin repeat domain 63 Neighboring gene p21 (RAC1) activated kinase 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_018338364 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol phospholipase C activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphatidylinositol-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ovir.te_1.0 Primary Assembly

    Genomic

    1. NW_018338364.1 Reference Ovir.te_1.0 Primary Assembly

      Range
      687331..708981
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020872362.1 → XP_020728021.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X4

      UniProtKB/TrEMBL
      A0A6J0VRW9
      Related
      ENSOVIP00010006824.1, ENSOVIT00010007713.1
      Conserved Domains (5) summary
      cd00275
      Location:679 → 800
      C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
      cd08624
      Location:310 → 647
      PI-PLCc_beta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2
      cd13361
      Location:17 → 143
      PH_PLC_beta; Phospholipase C-beta (PLC-beta) pleckstrin homology (PH) domain
      pfam08703
      Location:981 → 1155
      PLC-beta_C; PLC-beta C terminal
      cd16209
      Location:148 → 298
      EFh_PI-PLCbeta2; EF-hand motif found in phosphoinositide phospholipase C beta 2 (PI-PLC-beta2)

    2. XM_020872363.1 → XP_020728022.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X5

      UniProtKB/TrEMBL
      A0A6J0VRJ6
      Related
      ENSOVIP00010006854.1, ENSOVIT00010007745.1
      Conserved Domains (5) summary
      cd00275
      Location:679 → 800
      C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
      cd08624
      Location:310 → 647
      PI-PLCc_beta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2
      cd13361
      Location:17 → 143
      PH_PLC_beta; Phospholipase C-beta (PLC-beta) pleckstrin homology (PH) domain
      pfam08703
      Location:966 → 1140
      PLC-beta_C; PLC-beta C terminal
      cd16209
      Location:148 → 298
      EFh_PI-PLCbeta2; EF-hand motif found in phosphoinositide phospholipase C beta 2 (PI-PLC-beta2)

    3. XM_020872359.1 → XP_020728018.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X1

      UniProtKB/TrEMBL
      A0A6J0VS23
      Conserved Domains (4) summary
      cd00275
      Location:687 → 808
      C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
      cd08624
      Location:310 → 655
      PI-PLCc_beta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2
      cd13361
      Location:17 → 143
      PH_PLC_beta; Phospholipase C-beta (PLC-beta) pleckstrin homology (PH) domain
      cd16209
      Location:148 → 298
      EFh_PI-PLCbeta2; EF-hand motif found in phosphoinositide phospholipase C beta 2 (PI-PLC-beta2)

    4. XM_020872360.1 → XP_020728019.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X2

      UniProtKB/TrEMBL
      A0A6J0VWF5
      Conserved Domains (3) summary
      cd13361
      Location:17 → 143
      PH_PLC_beta; Phospholipase C-beta (PLC-beta) pleckstrin homology (PH) domain
      cd15898
      Location:148 → 177
      EFh_PI-PLC; EF-hand motif [structural motif]
      cl28895
      Location:148 → 227
      EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes

    5. XM_020872361.1 → XP_020728020.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X3

      UniProtKB/TrEMBL
      A0A6J0VV28
      Conserved Domains (3) summary
      cd13361
      Location:17 → 143
      PH_PLC_beta; Phospholipase C-beta (PLC-beta) pleckstrin homology (PH) domain
      cd15898
      Location:148 → 177
      EFh_PI-PLC; EF-hand motif [structural motif]
      cl28895
      Location:148 → 193
      EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes

    RNA

    1. XR_002309650.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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