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    Ring1 ring finger protein 1 [ Mus pahari (shrew mouse) ]

    Gene ID: 110335598, updated on 15-Mar-2024

    Summary

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    Gene symbol
    Ring1
    Gene description
    ring finger protein 1
    See related
    Ensembl:MGP_PahariEiJ_G0020434
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus pahari
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
    Orthologs
    human mouse all
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    Genomic context

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    See Ring1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 18 NC_034607.1 (1926454..1930244, complement)

    Chromosome 18 - NC_034607.1Genomic Context describing neighboring genes Neighboring gene H-2 class I histocompatibility antigen, D-B alpha chain-like Neighboring gene 60S ribosomal protein L27a pseudogene Neighboring gene hydroxysteroid 17-beta dehydrogenase 8 Neighboring gene solute carrier family 39 member 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_034607.1 Chromosome 18 Reference PAHARI_EIJ_v1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of PcG protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RING1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PAHARI_EIJ_v1.1

    Genomic

    1. NC_034607.1 Reference PAHARI_EIJ_v1.1

      Range
      1926454..1930244 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021217826.1 → XP_021073485.1  E3 ubiquitin-protein ligase RING1

      Related
      MGP_PahariEiJ_P0043655, MGP_PahariEiJ_T0043655.1
      Conserved Domains (2) summary
      pfam16207
      Location:282 → 400
      RAWUL; RAWUL domain RING finger- and WD40-associated ubiquitin-like
      cd16739
      Location:47 → 90
      RING-HC_RING1; RING finger, HC subclass, found in really interesting new gene 1 protein (RING1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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