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    LOC100333391 uncharacterized protein K02A2.6-like [ Danio rerio (zebrafish) ]

    Gene ID: 100333391, updated on 27-Mar-2024

    Summary

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    Gene symbol
    LOC100333391
    Gene description
    uncharacterized protein K02A2.6-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Annotation information
    Annotation category: only annotated on alternate loci in reference assembly
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    Genomic context

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    See LOC100333391 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 10 Unlocalized Scaffold (ALT_DRER_TU_1) NW_018394781.1 (167648..170154)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (57690013..57694498)

    NW_018394781.1Genomic Context describing neighboring genes Neighboring gene avidin Neighboring gene uncharacterized LOC103911741 Neighboring gene transient receptor potential cation channel, subfamily C, member 7a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    uncharacterized protein K02A2.6-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394781.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      167648..170154
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002663179.5 → XP_002663225.3  uncharacterized protein K02A2.6-like

      UniProtKB/TrEMBL
      A0A8M1RKD0
      Conserved Domains (4) summary
      cd09274
      Location:159 → 284
      RNase_HI_RT_Ty3; Ty3/Gypsy family of RNase HI in long-term repeat retroelements
      cl02808
      Location:1 → 65
      RT_like; Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, retroviruses, group ...
      pfam00665
      Location:427 → 544
      rve; Integrase core domain
      cl07828
      Location:383 → 417
      zf-H2C2; His(2)-Cys(2) zinc finger
    Nucleotide Protein Strain
    Heading Accession and Version

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