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    LOC102090851 hemoglobin subunit alpha-A-like [ Columba livia (rock pigeon) ]

    Gene ID: 102090851, updated on 3-Aug-2024

    Summary

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    Gene symbol
    LOC102090851
    Gene description
    hemoglobin subunit alpha-A-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Columba livia
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
    Also known as
    HBA2; HBAA; alpha-A
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    Genomic context

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    See LOC102090851 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 15 NC_088616.1 (4499221..4500128, complement)
    102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973488.1 (2898569..2899396)

    Chromosome 15 - NC_088616.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L28 Neighboring gene post-GPI attachment to proteins 6 Neighboring gene hemoglobin subunit pi Neighboring gene hemoglobin subunit alpha-D-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables haptoglobin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables organic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxygen binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxygen carrier activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hydrogen peroxide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oxygen transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in blood microparticle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of haptoglobin-hemoglobin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of hemoglobin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hemoglobin subunit alpha-A
    Names
    Hemoglobin alpha-A chain
    Hemoglobin subunit alpha-A
    alpah-A globin
    alpha-A globin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bColLiv1.pat.W.v2

    Genomic

    1. NC_088616.1 Reference bColLiv1.pat.W.v2

      Range
      4499221..4500128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005508461.2 → XP_005508518.1  hemoglobin subunit alpha-A

      See identical proteins and their annotated locations for XP_005508518.1

      UniProtKB/Swiss-Prot
      O12986, P21871, Q91249
      UniProtKB/TrEMBL
      A0A2I0M4D4
      Conserved Domains (1) summary
      cd08927
      Location:3 → 142
      Hb-alpha_like; Hemoglobin alpha, zeta, mu, theta, and related Hb subunits
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P21871.2 GenPept UniProtKB/Swiss-Prot:P21871

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