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    LOC110942212 alcohol dehydrogenase 2 [ Helianthus annuus (common sunflower) ]

    Gene ID: 110942212, updated on 18-Sep-2024

    Summary

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    Gene symbol
    LOC110942212
    Gene description
    alcohol dehydrogenase 2
    Locus tag
    HanXRQr2_Chr05g0235441
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Helianthus annuus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
    Also known as
    ADH1
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    Genomic context

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    See LOC110942212 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current HanXRQr2.0-SUNRISE (GCF_002127325.2) 5 NC_035437.2 (173378889..173381304, complement)
    100 previous assembly HanXRQr1.0 (GCF_002127325.1) Linkage Group 5 NC_035437.1 (210348958..210351341, complement)

    Chromosome 5 - NC_035437.2Genomic Context describing neighboring genes Neighboring gene alcohol dehydrogenase 2-like Neighboring gene alcohol dehydrogenase 1 Neighboring gene alcohol dehydrogenase 2 Neighboring gene uncharacterized LOC110944128

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in formaldehyde catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alcohol dehydrogenase 1; alcohol dehydrogenase 2
    Names
    putative alcohol dehydrogenase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Helianthus annuus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HanXRQr2.0-SUNRISE Primary Assembly

    Genomic

    1. NC_035437.2 Reference HanXRQr2.0-SUNRISE Primary Assembly

      Range
      173378889..173381304 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022183960.2 → XP_022039652.1  alcohol dehydrogenase 2 isoform X2

      UniProtKB/TrEMBL
      A0A251UUW2
      Conserved Domains (1) summary
      cd08301
      Location:10 → 378
      alcohol_DH_plants; Plant alcohol dehydrogenase

    2. XM_022183959.2 → XP_022039651.1  alcohol dehydrogenase 1 isoform X1

      UniProtKB/TrEMBL
      A0A251UTE2, A0A251UUW2
      Conserved Domains (1) summary
      cd08301
      Location:91 → 459
      alcohol_DH_plants; Plant alcohol dehydrogenase
    Nucleotide Protein
    Heading Accession and Version

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