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    LOC111580649 complement factor B-like [ Amphiprion ocellaris (clown anemonefish) ]

    Gene ID: 111580649, updated on 18-Jun-2024

    Summary

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    Gene symbol
    LOC111580649
    Gene description
    complement factor B-like
    See related
    Ensembl:ENSAOCG00000007557
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Amphiprion ocellaris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
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    Genomic context

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    Location:
    chromosome: 14
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 14 NC_072779.1 (12747872..12758992)
    101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019373436.1 (177678..188765)

    Chromosome 14 - NC_072779.1Genomic Context describing neighboring genes Neighboring gene V-set and immunoglobulin domain-containing protein 10-like 2 Neighboring gene checkpoint kinase 1 Neighboring gene layilin a Neighboring gene ALG9 alpha-1,2-mannosyltransferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in complement activation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    complement factor B-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2253959v1 Primary Assembly

    Genomic

    1. NC_072779.1 Reference ASM2253959v1 Primary Assembly

      Range
      12747872..12758992
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023288491.3 → XP_023144259.1  complement factor B-like isoform X1

      UniProtKB/TrEMBL
      A0A3Q1ARL5
      Related
      ENSAOCP00000004135.2, ENSAOCT00000008576.2
      Conserved Domains (4) summary
      cd00033
      Location:92 → 147
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00032
      Location:48 → 79
      CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
      cd00190
      Location:484 → 707
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      cl00057
      Location:255 → 455
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

    2. XM_023288492.3 → XP_023144260.1  complement factor B-like isoform X2

      UniProtKB/TrEMBL
      A0A3Q1ARL5
      Conserved Domains (4) summary
      cd00033
      Location:91 → 146
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00032
      Location:47 → 78
      CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
      cd00190
      Location:483 → 706
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      cl00057
      Location:254 → 454
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    Nucleotide Protein
    Heading Accession and Version

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