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    ORF47 ORF47 [ Human gammaherpesvirus 8 ]

    Gene ID: 4961475, updated on 18-Aug-2023

    Summary

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    Gene symbol
    ORF47
    Gene description
    ORF47
    Locus tag
    HHV8GK18_gp49
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Human gammaherpesvirus 8 (strain: GK18, type: P, common: Kaposi's sarcoma-associated herpesvirus, acronym: HHV-8, acronym: KSHV, nat-host: Homo sapiens)
    Lineage
    Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Gammaherpesvirinae; Rhadinovirus
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    Genomic context

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    Sequence:
    NC_009333.1 (67444..70014, complement)

    NC_009333.1Genomic Context describing neighboring genes Neighboring gene ORF40 Neighboring gene ORF42 Neighboring gene ORF43 Neighboring gene ORF44 Neighboring gene ORF45 Neighboring gene ORF46 Neighboring gene ORF48 Neighboring gene ORF50 Neighboring gene ORF49 Neighboring gene K8 Neighboring gene K8.1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009333.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Kaposi's sarcoma-associated herpesvirus immune modulation: an overview. Rezaee SAR, et al. J Gen Virol, 2006 Jul. PMID 16760382
    2. Global mapping of herpesvirus-host protein complexes reveals a transcription strategy for late genes. Davis ZH, et al. Mol Cell, 2015 Jan 22. PMID 25544563, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

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    Preferred Names
    ORF47
    YP_001129399.1
    • herpesvirus core gene UL1 family

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009333.1 Reference assembly

      Range
      67444..70014 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_001129399.1 ORF47 [Human gammaherpesvirus 8]

      See identical proteins and their annotated locations for YP_001129399.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      F5HDB7
      UniProtKB/TrEMBL
      A0A0N7GET8, A0A0N7GEW0, A0A7D3QHM8, P88935, Q2HR86, Q76RG7
      Conserved Domains (1) summary
      pfam11108
      Location:26 → 119
      Phage_glycop_gL; Viral glycoprotein L
    Nucleotide Protein
    Heading Accession and Version

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