U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    FA14DRAFT_162272 putative RPA12-13.7 kd subunit of DNA-directed RNA polymerase I [ Meira miltonrushii ]

    Gene ID: 37021289, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    FA14DRAFT_162272
    Gene description
    putative RPA12-13.7 kd subunit of DNA-directed RNA polymerase I
    Locus tag
    FA14DRAFT_162272
    Gene type
    protein coding
    RNA name
    putative RPA12-13.7 kd subunit of DNA-directed RNA polymerase I
    RefSeq status
    PROVISIONAL
    Organism
    Meira miltonrushii (strain: MCA 3882, type-material: holotype of Meira miltonrushii)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Exobasidiomycetes; Exobasidiales; Brachybasidiaceae; Meira
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See FA14DRAFT_162272 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_020289947.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_020289947.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Broad Genomic Sampling Reveals a Smut Pathogenic Ancestry of the Fungal Clade Ustilaginomycotina. Kijpornyongpan T, et al. Mol Biol Evol, 2018 Aug 1. PMID 29771364
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-directed 5'-3' RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in termination of RNA polymerase I transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase I complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative RPA12-13.7 kd subunit of DNA-directed RNA polymerase I

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_020289947.1 Reference assembly

      Range
      191041..192047
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025499508.1 → XP_025352244.1  putative RPA12-13.7 kd subunit of DNA-directed RNA polymerase I [Meira miltonrushii]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A316V3A9
      Conserved Domains (1) summary
      cd10507
      Location:83 → 129
      Zn-ribbon_RPA12; C-terminal zinc ribbon domain of RPA12 subunit of RNA polymerase I
    Protein Accession Links
    GenPept Link UniProtKB Link
    PWN31942.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases