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    RNGTT RNA guanylyltransferase and 5'-phosphatase [ Apteryx rowi (Okarito brown kiwi) ]

    Gene ID: 112974970, updated on 11-Apr-2024

    Summary

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    Gene symbol
    RNGTT
    Gene description
    RNA guanylyltransferase and 5'-phosphatase
    See related
    Ensembl:ENSARWG00000000783
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apteryx rowi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
    Orthologs
    human mouse all
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    Genomic context

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    See RNGTT in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020450920.1 (293047..490589)

    NW_020450920.1Genomic Context describing neighboring genes Neighboring gene BLOC-1 related complex subunit 6 Neighboring gene proline rich nuclear receptor coactivator 1 Neighboring gene uncharacterized LOC112974971

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020450920 Unplaced Scaffold Reference aptRow1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA 5'-triphosphate monophosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA guanylyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine/serine/threonine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in 7-methylguanosine mRNA capping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mRNA-capping enzyme

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aptRow1

    Genomic

    1. NW_020450920.1 Reference aptRow1

      Range
      293047..490589
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026084500.1 → XP_025940285.1  mRNA-capping enzyme isoform X1

      Related
      ENSARWP00000001632.1, ENSARWT00000001943.1
      Conserved Domains (3) summary
      cd07895
      Location:222 → 435
      Adenylation_mRNA_capping; Adenylation domain of GTP-dependent mRNA capping enzymes
      pfam03919
      Location:439 → 532
      mRNA_cap_C; mRNA capping enzyme, C-terminal domain
      cl21483
      Location:18 → 114
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

    2. XM_026084499.1 → XP_025940284.1  mRNA-capping enzyme isoform X1

      Related
      ENSARWP00000001584.1, ENSARWT00000001885.1
      Conserved Domains (3) summary
      cd07895
      Location:222 → 435
      Adenylation_mRNA_capping; Adenylation domain of GTP-dependent mRNA capping enzymes
      pfam03919
      Location:439 → 532
      mRNA_cap_C; mRNA capping enzyme, C-terminal domain
      cl21483
      Location:18 → 114
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

    3. XM_026084501.1 → XP_025940286.1  mRNA-capping enzyme isoform X2

      Related
      ENSARWP00000001589.1, ENSARWT00000001890.1
      Conserved Domains (2) summary
      cd07895
      Location:222 → 435
      Adenylation_mRNA_capping; Adenylation domain of GTP-dependent mRNA capping enzymes
      cl21483
      Location:18 → 114
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

    4. XM_026084502.1 → XP_025940287.1  mRNA-capping enzyme isoform X1

      Conserved Domains (3) summary
      cd07895
      Location:222 → 435
      Adenylation_mRNA_capping; Adenylation domain of GTP-dependent mRNA capping enzymes
      pfam03919
      Location:439 → 532
      mRNA_cap_C; mRNA capping enzyme, C-terminal domain
      cl21483
      Location:18 → 114
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    Nucleotide Protein
    Heading Accession and Version

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