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    PAS_chr2-1_0223 RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III [ Komagataella phaffii GS115 ]

    Gene ID: 8198605, updated on 23-Nov-2023

    Summary

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    Gene symbol
    PAS_chr2-1_0223
    Gene description
    RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III
    Locus tag
    PAS_chr2-1_0223
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Komagataella phaffii GS115 (strain: GS115)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_012964.1 (423742..423960)

    Chromosome 2 - NC_012964.1Genomic Context describing neighboring genes Neighboring gene Nicotinate phosphoribosyltransferase, acts in the salvage pathway of NAD+ biosynthesis Neighboring gene U3 snoRNP protein, component of the small (ribosomal) subunit (SSU) processosome containing U3 snoRN Neighboring gene Hypothetical protein Neighboring gene Zinc cluster transcriptional activator involved in conferring resistance to ketoconazole

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012964.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-directed 5'-3' RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA transcription by RNA polymerase III IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription by RNA polymerase I IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase I complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of RNA polymerase II, core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of RNA polymerase III complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012964.1 Reference assembly

      Range
      423742..423960
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002491068.1 → XP_002491113.1  RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III [Komagataella phaffii GS115]

      See identical proteins and their annotated locations for XP_002491113.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C4R009, F2QTN1
      Conserved Domains (1) summary
      PLN00032
      Location:1 → 70
      PLN00032; DNA-directed RNA polymerase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    5X4Z_J.1
    5X4Z_V.1
    5X50_J.1
    5X51_J.1
    5X51_V.1
    5XOG_J.1
    5XON_J.1
    6A5L_J.1
    6A5O_J.1
    6A5P_J.1
    6A5R_J.1
    6A5T_J.1
    6A5U_J.1
    6INQ_J.1
    6IR9_J.1
    6J4X_J.1
    6J4Y_J.1
    6J4Z_J.1
    6J50_J.1
    6J51_J.1

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