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    D7B24_000184 uncharacterized protein [ Verticillium nonalfalfae ]

    Gene ID: 39603873, updated on 30-Dec-2023

    Summary

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    Gene symbol
    D7B24_000184
    Gene description
    uncharacterized protein
    Locus tag
    D7B24_000184
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Verticillium nonalfalfae (strain: VnAa140/NRRL 66861, nat-host: Ailanthus altissima)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Plectosphaerellaceae; Verticillium
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    Genomic context

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    See D7B24_000184 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_021167226.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene PRP39 pre-mRNA processing factor 39 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_021167226.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome Sequence of a Lethal Vascular Wilt Fungus, Verticillium nonalfalfae, a Biological Control Used Against the Invasive Ailanthus altissima. Kasson MT, et al. Microbiol Resour Announc, 2019 Jan. PMID 30701257, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phosphatidylinositol dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_028499485.1
    • EggNog:ENOG41KOG0566
      COG:I
      BUSCO:EOG093303KI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_021167226.1 Reference assembly

      Range
      620585..624727 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028634445.1 → XP_028499485.1  uncharacterized protein D7B24_000184 [Verticillium nonalfalfae]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3M9YL54
      Conserved Domains (3) summary
      cd09090
      Location:653 → 950
      INPP5c_ScInp51p-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Saccharomyces cerevisiae Inp51p, Inp52p, and Inp53p, and related proteins
      PHA03247
      Location:1000 → 1309
      PHA03247; large tegument protein UL36; Provisional
      COG5329
      Location:21 → 680
      COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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