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    CSLB06 cellulose synthase-like B6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827198, updated on 7-Sep-2023

    Summary

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    Gene symbol
    CSLB06
    Gene description
    cellulose synthase-like B6
    Primary source
    Araport:AT4G15320
    Locus tag
    AT4G15320
    See related
    TAIR:AT4G15320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCSLB06; ATCSLB6; CELLULOSE SYNTHASE LIKE B6; cellulose synthase-like B6; DL3705C; FCAALL.268
    Summary
    encodes a gene similar to cellulose synthase
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    Genomic context

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    See CSLB06 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    12
    Sequence:
    Chromosome: 4; NC_003075.7 (8742639..8748025, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 702, subfamily A, polypeptide 2 Neighboring gene cytochrome P450, family 702, subfamily A, polypeptide 3 Neighboring gene miscRNA Neighboring gene cytochrome P450, family 705, subfamily A, polypeptide 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cellulose synthase (UDP-forming) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables cellulose synthase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellulose biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cellulose synthase-like B6
    NP_193267.1
    • cellulose synthase-like B6 (CSLB06); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: Cellulose synthase family protein (TAIR:AT4G15290.1); Has 2450 Blast hits to 2218 proteins in 444 species: Archae - 1; Bacteria - 809; Metazoa - 0; Fungi - 0; Plants - 1618; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      8742639..8748025 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001341028.1 → NP_001328692.1  cellulose synthase-like B6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JJG5, O23386
      UniProtKB/TrEMBL
      A0A1P8B5D7

    2. NM_117620.1 → NP_193267.1  cellulose synthase-like B6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193267.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JJG5, O23386
      Conserved Domains (2) summary
      PLN02190
      Location:1 → 809
      PLN02190; cellulose synthase-like protein
      cl11394
      Location:374 → 599
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    3. NM_001341029.1 → NP_001328691.1  cellulose synthase-like B6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B5F6, A0A5S9XSK9, A0A654FPH6
      Conserved Domains (1) summary
      PLN02190
      Location:1 → 757
      PLN02190; cellulose synthase-like protein

    4. NM_001341030.1 → NP_001328693.1  cellulose synthase-like B6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B5E9, A0A5S9XSK9

    5. NM_001341031.1 → NP_001328694.1  cellulose synthase-like B6, partial [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JJG5, O23386
      UniProtKB/TrEMBL
      A0A1P8B5F8
    Nucleotide Protein
    Heading Accession and Version

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