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    LOC113741079 uncharacterized LOC113741079 [ Coffea arabica (coffee) ]

    Gene ID: 113741079, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC113741079
    Gene description
    uncharacterized LOC113741079
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Coffea arabica
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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    Genomic context

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    See LOC113741079 in Genome Data Viewer
    Location:
    chromosome: 4e
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current Cara_1.0 (GCF_003713225.1) 4e NC_039905.1 (39236915..39241183, complement)

    Chromosome 4e - NC_039905.1Genomic Context describing neighboring genes Neighboring gene agamous-like MADS-box protein AGL65 Neighboring gene cytosolic sulfotransferase 1-like Neighboring gene small nucleolar RNA R71 Neighboring gene cytosolic sulfotransferase 12-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_039905.1 Chromosome 4e Reference Cara_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA-DNA hybrid ribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA integration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC113741079

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Coffea arabica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cara_1.0 Primary Assembly

    Genomic

    1. NC_039905.1 Reference Cara_1.0 Primary Assembly

      Range
      39236915..39241183 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027268564.1 → XP_027124365.1  uncharacterized protein LOC113741079

      UniProtKB/TrEMBL
      A0A6P6X9E8
    Nucleotide Protein
    Heading Accession and Version

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