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    Cryaa crystallin alpha A [ Marmota flaviventris (yellow-bellied marmot) ]

    Gene ID: 114087696, updated on 15-Mar-2024

    Summary

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    Gene symbol
    Cryaa
    Gene description
    crystallin alpha A
    See related
    EnsemblRapid:ENSMFVG00000007858
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Marmota flaviventris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current GSC_YBM_2.0 (GCF_003676075.2) Unplaced Scaffold NW_023144754.1 (949831..952893, complement)
    100 previous assembly ASM367607v1 (GCF_003676075.1) Unplaced Scaffold NW_020963093.1 (948828..951890, complement)

    NW_023144754.1Genomic Context describing neighboring genes Neighboring gene heat shock transcription factor 2 binding protein Neighboring gene salt inducible kinase 1 Neighboring gene U2 small nuclear RNA auxiliary factor 1 Neighboring gene cystathionine beta-synthase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein folding chaperone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of eye lens IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lens development in camera-type eye IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to heat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-crystallin A chain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Marmota flaviventris Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GSC_YBM_2.0 Primary Assembly

    Genomic

    1. NW_023144754.1 Reference GSC_YBM_2.0 Primary Assembly

      Range
      949831..952893 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027929259.1 → XP_027785060.1  alpha-crystallin A chain isoform X3

      Related
      ENSMFVP00000012741.1, ENSMFVT00000014209.1
      Conserved Domains (2) summary
      cd06497
      Location:60 → 145
      ACD_alphaA-crystallin_HspB4; Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers ...
      pfam00525
      Location:1 → 51
      Crystallin; Alpha crystallin A chain, N terminal

    2. XM_027929258.1 → XP_027785059.1  alpha-crystallin A chain isoform X2

    3. XM_027929257.1 → XP_027785058.1  alpha-crystallin A chain isoform X1

    Nucleotide Protein
    Heading Accession and Version

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