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    LF3 protein LF3 [ Human gammaherpesvirus 4 (Epstein-Barr virus) ]

    Gene ID: 3783749, updated on 29-Jul-2022

    Summary

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    Gene symbol
    LF3
    Gene description
    protein LF3
    Locus tag
    HHV4_LF3
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Human gammaherpesvirus 4 (strain: B95-8, strain: Raji, type: 1, common: Epstein-Barr virus, acronym: EBV, acronym: HHV-4, nat-host: Homo sapiens)
    Lineage
    Viruses; Herpesvirales; Herpesviridae; Gammaherpesvirinae; Lymphocryptovirus
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    Genomic context

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    Sequence:
    NC_007605.1 (140570..143711, complement)

    NC_007605.1Genomic Context describing neighboring genes Neighboring gene capsid maturation protease Neighboring gene capsid scaffold protein Neighboring gene membrane protein BILF2 Neighboring gene protein RPMS1 Neighboring gene membrane protein BILF1 Neighboring gene virion protein G11 Neighboring gene protein G10 Neighboring gene DNA polymerase catalytic subunit Neighboring gene protein A73 Neighboring gene envelope glycoprotein B Neighboring gene DNA packaging terminase subunit 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007605.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Updated Epstein-Barr virus (EBV) DNA sequence and analysis of a promoter for the BART (CST, BARF0) RNAs of EBV. de Jesus O, et al. J Gen Virol, 2003 Jun. PMID 12771413
    2. The EB virus genome in Daudi Burkitt's lymphoma cells has a deletion similar to that observed in a non-transforming strain (P3HR-1) of the virus. Jones MD, et al. EMBO J, 1984 Apr. PMID 6327290, Free PMC Article
    3. Organization of the Epstein-Barr virus DNA molecule. III. Location of the P3HR-1 deletion junction and characterization of the NotI repeat units that form part of the template for an abundant 12-O-tetradecanoylphorbol-13-acetate-induced mRNA transcript. Jeang KT, et al. J Virol, 1983 Oct. PMID 6310141, Free PMC Article
    4. DNA sequence and expression of the B95-8 Epstein-Barr virus genome. Baer R, et al. Nature, 1984 Jul 19-25. PMID 6087149
    5. Sequence analysis of Raji Epstein-Barr virus DNA. Hatfull G, et al. Virology, 1988 Jun. PMID 2835854

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    regulatory

    • Loc: c140711-140706 regulatory_class = polyA_signal_sequence
    • Loc: c143447-143442 regulatory_class = TATA_box
    • Loc: c143711-143706 regulatory_class = TATA_box

    General protein information

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    Preferred Names
    protein LF3
    YP_401707.1
    • questionable whether a protein function is encoded

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007605.1 Reference assembly

      Range
      140570..143711 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_401707.1 protein LF3 [Human gammaherpesvirus 4]

      See identical proteins and their annotated locations for YP_401707.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P0C727, P0C728, Q99307
      UniProtKB/TrEMBL
      A0A0A7DJX8
      Conserved Domains (1) summary
      PHA03247
      Location:325 → 861
      PHA03247; large tegument protein UL36; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0C728.1

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