U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    foxo3b forkhead box O3b [ Salmo trutta (river trout) ]

    Gene ID: 115176439, updated on 17-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    foxo3b
    Gene description
    forkhead box O3b
    See related
    Ensembl:ENSSTUG00000010224
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salmo trutta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
    Also known as
    foxo3
    Orthologs
    zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See foxo3b in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current fSalTru1.1 (GCF_901001165.1) 1 NC_042957.1 (18904859..18957005)

    Chromosome 1 - NC_042957.1Genomic Context describing neighboring genes Neighboring gene sorting nexin-3-like Neighboring gene AFG1 like ATPase b Neighboring gene uncharacterized LOC115176529 Neighboring gene uncharacterized LOC115176679 Neighboring gene sestrin-1-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_042957.1 Chromosome 1 Reference fSalTru1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    forkhead box protein O3
    Names
    forkhead box O3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSalTru1.1 Primary Assembly

    Genomic

    1. NC_042957.1 Reference fSalTru1.1 Primary Assembly

      Range
      18904859..18957005
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029736506.1 → XP_029592366.1  forkhead box protein O3

      UniProtKB/TrEMBL
      A0A673XSF4
      Related
      ENSSTUP00000023411.1, ENSSTUT00000024556.1
      Conserved Domains (4) summary
      COG5025
      Location:63 → 229
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:136 → 216
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16675
      Location:434 → 511
      FOXO_KIX_bdg; KIX-binding domain of forkhead box O, CR2
      pfam16676
      Location:605 → 643
      FOXO-TAD; Transactivation domain of FOXO protein family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.