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    EPHA5 EPH receptor A5 [ Microcaecilia unicolor ]

    Gene ID: 115463796, updated on 11-Apr-2024

    Summary

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    Gene symbol
    EPHA5
    Gene description
    EPH receptor A5
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Microcaecilia unicolor
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
    Orthologs
    human mouse all
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    Genomic context

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    See EPHA5 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current aMicUni1.1 (GCF_901765095.1) 2 NC_044032.1 (377543558..378152806, complement)

    Chromosome 2 - NC_044032.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene U1 spliceosomal RNA Neighboring gene signal-transducing adaptor protein 1-like Neighboring gene centromere protein C

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044032.1 Chromosome 2 Reference aMicUni1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane-ephrin receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ephrin type-A receptor 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aMicUni1.1 Primary Assembly

    Genomic

    1. NC_044032.1 Reference aMicUni1.1 Primary Assembly

      Range
      377543558..378152806 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030194566.1 → XP_030050426.1  ephrin type-A receptor 5 isoform X1

      UniProtKB/TrEMBL
      A0A6P7XAU2
      Conserved Domains (5) summary
      cd10483
      Location:37 → 209
      EphR_LBD_A5; Ligand Binding Domain of Ephrin type-A Receptor 5
      cd00063
      Location:446 → 536
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05066
      Location:625 → 891
      PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
      pfam14575
      Location:555 → 625
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
      cl15755
      Location:920 → 985
      SAM_superfamily; SAM (Sterile alpha motif )

    2. XM_030194568.1 → XP_030050428.1  ephrin type-A receptor 5 isoform X2

      UniProtKB/TrEMBL
      A0A6P7XD40
      Conserved Domains (5) summary
      cd10483
      Location:37 → 209
      EphR_LBD_A5; Ligand Binding Domain of Ephrin type-A Receptor 5
      cd00063
      Location:446 → 536
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05066
      Location:626 → 892
      PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
      pfam14575
      Location:556 → 626
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
      cl15755
      Location:921 → 986
      SAM_superfamily; SAM (Sterile alpha motif )
    Nucleotide Protein
    Heading Accession and Version

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