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    VIL1 villin 1 [ Chelonoidis abingdonii (Abingdon island giant tortoise) ]

    Gene ID: 116815811, updated on 18-Mar-2024

    Summary

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    Gene symbol
    VIL1
    Gene description
    villin 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chelonoidis abingdonii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current ASM359739v1 (GCF_003597395.1) Unplaced Scaffold NW_022647696.1 (2607566..2626840)

    NW_022647696.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 11 member 1 Neighboring gene CTD small phosphatase 1 Neighboring gene ubiquitin specific peptidase 37 Neighboring gene CCR4-NOT transcription complex subunit 9 Neighboring gene uncharacterized LOC116815786

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022647696 Unplaced Scaffold Reference ASM359739v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-4,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament severing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin polymerization or depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in barbed-end actin filament capping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: villin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chelonoidis abingdonii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM359739v1

    Genomic

    1. NW_022647696.1 Reference ASM359739v1

      Range
      2607566..2626840
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032764463.1 → XP_032620354.1  LOW QUALITY PROTEIN: villin-1

      UniProtKB/TrEMBL
      A0A8C0GSB7
      Conserved Domains (6) summary
      cd11288
      Location:448 → 538
      gelsolin_S5_like; Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins
      cd11291
      Location:554 → 650
      gelsolin_S6_like; Gelsolin sub-domain 6-like domain found in gelsolin, severin, villin, and related proteins
      cd11292
      Location:185 → 280
      gelsolin_S3_like; Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins
      cd11293
      Location:327 → 427
      gelsolin_S4_like; Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins
      pfam02209
      Location:725 → 759
      VHP; Villin headpiece domain
      cl15697
      Location:17 → 85
      ADF_gelsolin; Actin depolymerization factor/cofilin- and gelsolin-like domains
    Nucleotide Protein
    Heading Accession and Version

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