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    BRD4 bromodomain containing 4 [ Catharus ustulatus (Swainson's thrush) ]

    Gene ID: 117009554, updated on 19-Mar-2024

    Summary

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    Gene symbol
    BRD4
    Gene description
    bromodomain containing 4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Catharus ustulatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Turdidae; Catharus
    Orthologs
    human mouse all
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    Genomic context

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    See BRD4 in Genome Data Viewer
    Location:
    chromosome: 33
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    101 current bCatUst1.pri.v2 (GCF_009819885.2) 33 NC_046253.1 (1780285..1854440)
    100 previous assembly bCatUst1.pri (GCF_009819885.1) 33 NC_046253.1 (1780285..1854388)

    Chromosome 33 - NC_046253.1Genomic Context describing neighboring genes Neighboring gene A-kinase anchoring protein 8 like Neighboring gene A-kinase anchoring protein 8 Neighboring gene macrophage mannose receptor 1-like Neighboring gene epoxide hydrolase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lysine-acetylated histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription elongation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bromodomain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Catharus ustulatus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bCatUst1.pri.v2

    Genomic

    1. NC_046253.1 Reference bCatUst1.pri.v2

      Range
      1780285..1854440
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033083801.2 → XP_032939692.1  bromodomain-containing protein 4 isoform X1

      Conserved Domains (4) summary
      cd05497
      Location:76 → 182
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:364 → 465
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17035
      Location:621 → 685
      BET; Bromodomain extra-terminal - transcription regulation
      pfam17105
      Location:1338 → 1380
      BRD4_CDT; C-terminal domain of bromodomain protein 4

    2. XM_033083802.2 → XP_032939693.1  bromodomain-containing protein 4 isoform X2

      Conserved Domains (3) summary
      cd05497
      Location:76 → 182
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:364 → 465
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17035
      Location:621 → 685
      BET; Bromodomain extra-terminal - transcription regulation

    3. XM_033083799.2 → XP_032939690.1  bromodomain-containing protein 4 isoform X1

      Conserved Domains (4) summary
      cd05497
      Location:76 → 182
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:364 → 465
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17035
      Location:621 → 685
      BET; Bromodomain extra-terminal - transcription regulation
      pfam17105
      Location:1338 → 1380
      BRD4_CDT; C-terminal domain of bromodomain protein 4

    4. XM_033083800.2 → XP_032939691.1  bromodomain-containing protein 4 isoform X1

      Conserved Domains (4) summary
      cd05497
      Location:76 → 182
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:364 → 465
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17035
      Location:621 → 685
      BET; Bromodomain extra-terminal - transcription regulation
      pfam17105
      Location:1338 → 1380
      BRD4_CDT; C-terminal domain of bromodomain protein 4
    Nucleotide Protein
    Heading Accession and Version

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