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    mask multiple ankyrin repeats single KH domain [ Bombus impatiens (common eastern bumble bee) ]

    Gene ID: 100740063, updated on 16-May-2024

    Summary

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    Gene symbol
    mask
    Gene description
    multiple ankyrin repeats single KH domain
    See related
    EnsemblRapid:ENSBIMG00000009500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bombus impatiens
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
    Orthologs
    fruit fly all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    103 current BIMP_2.2 (GCF_000188095.3) Unplaced Scaffold NT_177083.1 (517578..537385, complement)

    NT_177083.1Genomic Context describing neighboring genes Neighboring gene NAD-dependent protein deacetylase sirtuin-1 Neighboring gene translocase of inner mitochondrial membrane 23 Neighboring gene phenylalanine--tRNA ligase beta subunit Neighboring gene protein cornichon

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NT_177083 Unplaced Scaffold Reference BIMP_2.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genes involved in convergent evolution of eusociality in bees. Woodard SH, et al. Proc Natl Acad Sci U S A, 2011 May 3. PMID 21482769, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat domain-containing protein 17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bombus impatiens Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BIMP_2.2

    Genomic

    1. NT_177083.1 Reference BIMP_2.2

      Range
      517578..537385 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033322732.1 → XP_033178623.1  ankyrin repeat domain-containing protein 17 isoform X1

      UniProtKB/TrEMBL
      A0A6P8LA14
      Conserved Domains (7) summary
      PHA03095
      Location:231 → 486
      PHA03095; ankyrin-like protein; Provisional
      COG0666
      Location:1486 → 1554
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:247 → 276
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:481 → 529
      Ank_4; Ankyrin repeats (many copies)
      pfam12796
      Location:513 → 604
      Ank_2; Ankyrin repeats (3 copies)
      cd22404
      Location:2169 → 2239
      KH-I_MASK; type I K homology (KH) RNA-binding domain found in Mask family proteins
      cl39094
      Location:1527 → 1809
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_003492169.4 → XP_003492217.1  ankyrin repeat domain-containing protein 17 isoform X4

      UniProtKB/TrEMBL
      A0A6P3E0U6
      Related
      ENSBIMP00000013307.1, ENSBIMT00000023943.1
      Conserved Domains (6) summary
      cd00105
      Location:2157 → 2219
      KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
      cd00204
      Location:234 → 353
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:237 → 326
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:468 → 516
      Ank_4; Ankyrin repeats (many copies)
      pfam13857
      Location:318 → 373
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:234 → 263
      ANK; ANK repeat [structural motif]

    3. XM_033322734.1 → XP_033178625.1  ankyrin repeat domain-containing protein 17 isoform X3

      UniProtKB/TrEMBL
      A0A6P8L3Z8
      Conserved Domains (7) summary
      PHA03095
      Location:231 → 486
      PHA03095; ankyrin-like protein; Provisional
      COG0666
      Location:1476 → 1544
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:247 → 276
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:481 → 529
      Ank_4; Ankyrin repeats (many copies)
      pfam12796
      Location:513 → 604
      Ank_2; Ankyrin repeats (3 copies)
      cd22404
      Location:2159 → 2229
      KH-I_MASK; type I K homology (KH) RNA-binding domain found in Mask family proteins
      cl39094
      Location:1517 → 1799
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_033322733.1 → XP_033178624.1  ankyrin repeat domain-containing protein 17 isoform X2

      UniProtKB/TrEMBL
      A0A6P8LVR4
      Conserved Domains (7) summary
      PHA03095
      Location:231 → 486
      PHA03095; ankyrin-like protein; Provisional
      COG0666
      Location:1485 → 1553
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:247 → 276
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:481 → 529
      Ank_4; Ankyrin repeats (many copies)
      pfam12796
      Location:513 → 604
      Ank_2; Ankyrin repeats (3 copies)
      cd22404
      Location:2168 → 2238
      KH-I_MASK; type I K homology (KH) RNA-binding domain found in Mask family proteins
      cl39094
      Location:1526 → 1808
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_012389737.3 → XP_012245160.1  ankyrin repeat domain-containing protein 17 isoform X5

      UniProtKB/TrEMBL
      A0A6P3V122
      Related
      ENSBIMP00000013308.1, ENSBIMT00000023949.1
      Conserved Domains (6) summary
      cd00105
      Location:2107 → 2169
      KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
      cd00204
      Location:184 → 303
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:187 → 276
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:418 → 466
      Ank_4; Ankyrin repeats (many copies)
      pfam13857
      Location:268 → 323
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:184 → 213
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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