U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    clns1a chloride channel, nucleotide-sensitive, 1A [ Pseudochaenichthys georgianus (South Georgia icefish) ]

    Gene ID: 117457315, updated on 19-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    clns1a
    Gene description
    chloride channel, nucleotide-sensitive, 1A
    See related
    EnsemblRapid:ENSPGEG00000022820
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pseudochaenichthys georgianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Channichthyidae; Pseudochaenichthys
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See clns1a in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current fPseGeo1.1 (GCF_902827115.1) 13 NC_047515.1 (884691..896123)

    Chromosome 13 - NC_047515.1Genomic Context describing neighboring genes Neighboring gene pannexin-1-like Neighboring gene remodeling and spacing factor 1a Neighboring gene p21 protein (Cdc42/Rac)-activated kinase 1 Neighboring gene solute carrier family 35 member F2-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_047515.1 Chromosome 13 Reference fPseGeo1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell volume homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chloride transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mRNA cis splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spliceosomal snRNP assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of methylosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of pICln-Sm protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    methylosome subunit pICln

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Pseudochaenichthys georgianus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fPseGeo1.1

    Genomic

    1. NC_047515.1 Reference fPseGeo1.1

      Range
      884691..896123
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034097317.1 → XP_033953208.1  methylosome subunit pICln isoform X2

      Related
      ENSPGEP00000052933.1, ENSPGET00000054911.1
      Conserved Domains (1) summary
      pfam03517
      Location:33 → 165
      Voldacs; Regulator of volume decrease after cellular swelling

    2. XM_034097316.1 → XP_033953207.1  methylosome subunit pICln isoform X1

      Conserved Domains (1) summary
      pfam03517
      Location:33 → 167
      Voldacs; Regulator of volume decrease after cellular swelling
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.