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    PTPRE protein tyrosine phosphatase receptor type E [ Oxyura jamaicensis (ruddy duck) ]

    Gene ID: 118168992, updated on 20-Mar-2024

    Summary

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    Gene symbol
    PTPRE
    Gene description
    protein tyrosine phosphatase receptor type E
    See related
    EnsemblRapid:ENSOJMG00000015703
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oxyura jamaicensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Oxyura
    Orthologs
    human mouse all
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    Genomic context

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    See PTPRE in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    100 current BPBGC_Ojam_1.0 (GCF_011077185.1) 6 NC_048898.1 (33566562..33658204)

    Chromosome 6 - NC_048898.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118169424 Neighboring gene forkhead box I2 Neighboring gene clarin 3 Neighboring gene uncharacterized LOC118169036 Neighboring gene marker of proliferation Ki-67 Neighboring gene uncharacterized LOC118169037

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_048898.1 Chromosome 6 Reference BPBGC_Ojam_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    receptor-type tyrosine-protein phosphatase epsilon

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oxyura jamaicensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BPBGC_Ojam_1.0

    Genomic

    1. NC_048898.1 Reference BPBGC_Ojam_1.0

      Range
      33566562..33658204
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035329856.1 → XP_035185747.1  receptor-type tyrosine-protein phosphatase epsilon isoform X4

      Conserved Domains (2) summary
      cd14620
      Location:164 → 391
      R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
      cd14622
      Location:478 → 685
      R-PTPc-E-2; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 2

    2. XM_035329857.1 → XP_035185748.1  receptor-type tyrosine-protein phosphatase epsilon isoform X4

      Conserved Domains (2) summary
      cd14620
      Location:164 → 391
      R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
      cd14622
      Location:478 → 685
      R-PTPc-E-2; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 2

    3. XM_035329852.1 → XP_035185743.1  receptor-type tyrosine-protein phosphatase epsilon isoform X1

      Conserved Domains (2) summary
      cd14620
      Location:228 → 455
      R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
      cd14622
      Location:542 → 749
      R-PTPc-E-2; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 2

    4. XM_035329858.1 → XP_035185749.1  receptor-type tyrosine-protein phosphatase epsilon isoform X4

      Related
      ENSOJMP00000024614.1, ENSOJMT00000025770.1
      Conserved Domains (2) summary
      cd14620
      Location:164 → 391
      R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
      cd14622
      Location:478 → 685
      R-PTPc-E-2; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 2

    5. XM_035329855.1 → XP_035185746.1  receptor-type tyrosine-protein phosphatase epsilon isoform X3

      Conserved Domains (2) summary
      cd14620
      Location:179 → 406
      R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
      cd14622
      Location:493 → 700
      R-PTPc-E-2; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 2

    6. XM_035329861.1 → XP_035185752.1  receptor-type tyrosine-protein phosphatase epsilon isoform X4

      Conserved Domains (2) summary
      cd14620
      Location:164 → 391
      R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
      cd14622
      Location:478 → 685
      R-PTPc-E-2; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 2

    7. XM_035329853.1 → XP_035185744.1  receptor-type tyrosine-protein phosphatase epsilon isoform X2

      Conserved Domains (2) summary
      cd14620
      Location:190 → 417
      R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
      cd14622
      Location:504 → 711
      R-PTPc-E-2; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 2

    8. XM_035329862.1 → XP_035185753.1  receptor-type tyrosine-protein phosphatase epsilon isoform X4

      Conserved Domains (2) summary
      cd14620
      Location:164 → 391
      R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
      cd14622
      Location:478 → 685
      R-PTPc-E-2; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 2

    9. XM_035329859.1 → XP_035185750.1  receptor-type tyrosine-protein phosphatase epsilon isoform X4

      Conserved Domains (2) summary
      cd14620
      Location:164 → 391
      R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
      cd14622
      Location:478 → 685
      R-PTPc-E-2; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 2

    10. XM_035329860.1 → XP_035185751.1  receptor-type tyrosine-protein phosphatase epsilon isoform X5

      Conserved Domains (2) summary
      cd14620
      Location:106 → 333
      R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
      cd14622
      Location:420 → 627
      R-PTPc-E-2; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 2
    Nucleotide Protein
    Heading Accession and Version

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