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    LOC118192902 cyclic AMP-dependent transcription factor ATF-1-like [ Stegodyphus dumicola ]

    Gene ID: 118192902, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC118192902
    Gene description
    cyclic AMP-dependent transcription factor ATF-1-like
    See related
    EnsemblRapid:LOC118192902
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Stegodyphus dumicola
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Eresoidea; Eresidae; Stegodyphus
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    Genomic context

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    See LOC118192902 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current ASM1061486v1 (GCF_010614865.1) Unplaced Scaffold NW_023318329.1 (244548..345498, complement)

    NW_023318329.1Genomic Context describing neighboring genes Neighboring gene DNA polymerase alpha catalytic subunit Neighboring gene uncharacterized LOC118192901

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023318329 Unplaced Scaffold Reference ASM1061486v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclic AMP-dependent transcription factor ATF-1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Stegodyphus dumicola Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1061486v1

    Genomic

    1. NW_023318329.1 Reference ASM1061486v1

      Range
      244548..345498 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035363923.1 → XP_035219814.1  cyclic AMP-dependent transcription factor ATF-1-like isoform X3

      Related
      XP_035219814.1, XM_035363923.1
      Conserved Domains (2) summary
      cd14690
      Location:343 → 397
      bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
      pfam02173
      Location:171 → 202
      pKID; pKID domain

    2. XM_035363922.1 → XP_035219813.1  cyclic AMP-dependent transcription factor ATF-1-like isoform X2

      Related
      XP_035219813.1, XM_035363922.1
      Conserved Domains (2) summary
      cd14690
      Location:345 → 399
      bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
      pfam02173
      Location:173 → 204
      pKID; pKID domain

    3. XM_035363918.1 → XP_035219809.1  cyclic AMP-dependent transcription factor ATF-1-like isoform X1

      Related
      XP_035219809.1, XM_035363918.1
      Conserved Domains (2) summary
      cd14690
      Location:350 → 404
      bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
      pfam02173
      Location:178 → 209
      pKID; pKID domain

    4. XM_035363920.1 → XP_035219811.1  cyclic AMP-dependent transcription factor ATF-1-like isoform X1

      Related
      XP_035219811.1, XM_035363920.1
      Conserved Domains (2) summary
      cd14690
      Location:350 → 404
      bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
      pfam02173
      Location:178 → 209
      pKID; pKID domain

    5. XM_035363919.1 → XP_035219810.1  cyclic AMP-dependent transcription factor ATF-1-like isoform X1

      Related
      XP_035219810.1, XM_035363919.1
      Conserved Domains (2) summary
      cd14690
      Location:350 → 404
      bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
      pfam02173
      Location:178 → 209
      pKID; pKID domain
    Nucleotide Protein
    Heading Accession and Version

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