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    Amigo1 adhesion molecule with Ig like domain 1 [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100772963, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Amigo1
    Gene description
    adhesion molecule with Ig like domain 1
    See related
    Ensembl:ENSCGRG00015033231
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Orthologs
    human mouse all
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    Genomic context

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    See Amigo1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614997.1 (134646..136127)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (48951255..48952736, complement)

    NW_003614997.1Genomic Context describing neighboring genes Neighboring gene G protein subunit alpha i3 Neighboring gene G protein-coupled receptor 61 Neighboring gene cytochrome b561 domain-containing protein 1 Neighboring gene uncharacterized LOC118239482 Neighboring gene ataxin 7 like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    amphoterin-induced protein 1
    Names
    Amphoterin-induced protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003614997.1 Reference CriGri_1.0 Primary Assembly

      Range
      134646..136127
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035461531.1 → XP_035317422.1  amphoterin-induced protein 1

      UniProtKB/TrEMBL
      G3I7A5
      Conserved Domains (5) summary
      smart00013
      Location:34 → 63
      LRRNT; Leucine rich repeat N-terminal domain
      smart00410
      Location:279 → 358
      IG_like; Immunoglobulin like
      COG4886
      Location:66 → 242
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:66 → 87
      LRR_RI; leucine-rich repeat [structural motif]
      cd00096
      Location:285 → 296
      Ig; Ig strand B [structural motif]

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NW_023276806.1 Alternate CriGri-PICRH-1.0

      Range
      48951255..48952736 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035450671.1 → XP_035306562.1  amphoterin-induced protein 1

      UniProtKB/TrEMBL
      A0A061IID2
      Related
      ENSCGRP00015046760.1, ENSCGRT00015050316.1
      Conserved Domains (5) summary
      smart00013
      Location:34 → 63
      LRRNT; Leucine rich repeat N-terminal domain
      smart00410
      Location:279 → 358
      IG_like; Immunoglobulin like
      COG4886
      Location:66 → 242
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:66 → 87
      LRR_RI; leucine-rich repeat [structural motif]
      cd00096
      Location:285 → 296
      Ig; Ig strand B [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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