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    ToMarV_RNA2gp2 polyprotein [ Tomato marchitez virus ]

    Gene ID: 6391318, updated on 18-Aug-2023

    Summary

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    Gene symbol
    ToMarV_RNA2gp2
    Gene description
    polyprotein
    Locus tag
    ToMarV_RNA2gp2
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Tomato marchitez virus (isolate: PRI-TMarV0601)
    Lineage
    Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; Secoviridae; Torradovirus
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    Genomic context

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    Location:
    segment: RNA 2
    Sequence:
    NC_010988.1 (671..4246)

    NC_010988.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_010988.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Tomato marchitez virus, a new plant picorna-like virus from tomato related to tomato torrado virus. Verbeek M, et al. Arch Virol, 2008. PMID 17965923

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    polyprotein
    Names
    Coat protein A
    Coat protein B
    Coat protein C

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_010988.1 Reference assembly

      Range
      671..4246
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_001976149.1 polyprotein [Tomato marchitez virus]

      See identical proteins and their annotated locations for YP_001976149.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A4D7AEN7, A9UC63
      Conserved Domains (2) summary
      pfam00803
      Location:15 → 225
      3A; 3A/RNA2 movement protein family
      cl13999
      Location:742 → 901
      rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...

    2. YP_001976155.1 Coat protein A

    3. YP_001976156.1 Coat protein B

      Conserved Domains (1) summary
      cl13999
      Location:20 → 179
      rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...

    4. YP_001976157.1 Coat protein C

    Nucleotide Protein
    Heading Accession and Version

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