U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    ECU02_0140 uncharacterized protein [ Encephalitozoon cuniculi GB-M1 ]

    Gene ID: 858531, updated on 17-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    ECU02_0140
    Gene description
    uncharacterized protein
    Locus tag
    ECU02_0140
    See related
    MicrosporidiaDB:ECU02_0140; VEuPathDB:ECU02_0140
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Encephalitozoon cuniculi GB-M1 (isolate: GB-M1)
    Lineage
    Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Unikaryonidae; Encephalitozoon
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ECU02_0140 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003229.1 (19799..20458, complement)

    Chromosome II - NC_003229.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003229.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Identification of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation. Peyretaillade E, et al. BMC Genomics, 2009 Dec 15. PMID 20003517, Free PMC Article
    2. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Katinka MD, et al. Nature, 2001 Nov 22. PMID 11719806
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    NP_584541.1
    • 02_0140, RAN SPECIFIC GTPASE ACTIVATING PROTEIN, RANG_yeast, gene found by Glimmer

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003229.1 Reference assembly

      Range
      19799..20458 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001040730.1 → NP_584541.1  uncharacterized protein ECU02_0140 [Encephalitozoon cuniculi GB-M1]

      See identical proteins and their annotated locations for NP_584541.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q8SSI6
      UniProtKB/TrEMBL
      M1K3W5
      Conserved Domains (2) summary
      COG5171
      Location:2 → 215
      YRB1; Ran GTPase-activating protein (Ran-binding protein) [Intracellular trafficking and secretion]
      cd00835
      Location:85 → 205
      RanBD_family; Ran-binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SSI6.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials