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    SMARCA4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 [ Falco rusticolus (gyrfalcon) ]

    Gene ID: 119156846, updated on 20-Sep-2024

    Summary

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    Gene symbol
    SMARCA4
    Gene description
    SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Falco rusticolus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
    Orthologs
    human mouse all
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    Genomic context

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    See SMARCA4 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    35
    Annotation release Status Assembly Chr Location
    100 current bFalRus1.pri (GCF_015220075.1) 13 NC_051199.1 (229287..262466, complement)

    Chromosome 13 - NC_051199.1Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel subunit alpha1 A Neighboring gene immediate early response 2 Neighboring gene dynamin 2 Neighboring gene queuine tRNA-ribosyltransferase catalytic subunit 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051199.1 Chromosome 13 Reference bFalRus1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription activator BRG1
    Names
    SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Falco rusticolus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bFalRus1.pri Primary Assembly

    Genomic

    1. NC_051199.1 Reference bFalRus1.pri Primary Assembly

      Range
      229287..262466 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037407225.1 → XP_037263122.1  transcription activator BRG1

      Conserved Domains (9) summary
      cd05516
      Location:1776 → 1882
      Bromo_SNF2L2; Bromodomain, SNF2L2-like subfamily, specific to animals. SNF2L2 (SNF2-alpha) or SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 is a global transcriptional activator, which cooperates with nuclear hormone ...
      smart00573
      Location:779 → 851
      HSA; domain in helicases and associated with SANT domains
      PLN03142
      Location:1068 → 1550
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      COG1196
      Location:689 → 871
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam09606
      Location:363 → 570
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      cd18062
      Location:1049 → 1299
      DEXHc_SMARCA4; DEXH-box helicase domain of SMARCA4
      pfam07533
      Location:931 → 973
      BRK; BRK domain
      pfam08880
      Location:492 → 526
      QLQ
      pfam14619
      Location:1641 → 1707
      SnAC; Snf2-ATP coupling, chromatin remodelling complex
    Nucleotide Protein
    Heading Accession and Version

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