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    ptprga protein tyrosine phosphatase receptor type Ga [ Pygocentrus nattereri (red-bellied piranha) ]

    Gene ID: 108436008, updated on 12-Sep-2024

    Summary

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    Gene symbol
    ptprga
    Gene description
    protein tyrosine phosphatase receptor type Ga
    See related
    Ensembl:ENSPNAG00000012931
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pygocentrus nattereri
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
    Also known as
    ptprg
    Orthologs
    zebrafish all
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    Genomic context

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    See ptprga in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    101 current fPygNat1.pri (GCF_015220715.1) 21 NC_051231.1 (25158120..25597116, complement)
    100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016243761.1 (5258875..5690949)

    Chromosome 21 - NC_051231.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108435086 Neighboring gene uncharacterized LOC108435077 Neighboring gene CSE1 chromosome segregation 1-like (yeast) Neighboring gene fragile histidine triad diadenosine triphosphatase Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC108434898

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    receptor-type tyrosine-protein phosphatase gamma
    Names
    protein tyrosine phosphatase receptor type G

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fPygNat1.pri

    Genomic

    1. NC_051231.1 Reference fPygNat1.pri

      Range
      25158120..25597116 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037532284.1 → XP_037388181.1  receptor-type tyrosine-protein phosphatase gamma isoform X2

      Related
      ENSPNAP00000070871.1, ENSPNAT00000082786.1
      Conserved Domains (4) summary
      smart00060
      Location:311 → 389
      FN3; Fibronectin type 3 domain
      cd03122
      Location:38 → 286
      alpha_CARP_receptor_like; Carbonic anhydrase alpha related protein, receptor_like subfamily. Carbonic anhydrase related proteins (CARPs) are sequence similar to carbonic anhydrases. Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon ...
      cd17667
      Location:779 → 1052
      R-PTPc-G-1; catalytic domain of receptor-type tyrosine-protein phosphatase G, repeat 1
      cd17670
      Location:1136 → 1340
      R-PTP-G-2; PTP-like domain of receptor-type tyrosine-protein phosphatase G, repeat 2

    2. XM_017712211.2 → XP_017567700.1  receptor-type tyrosine-protein phosphatase gamma isoform X1

      UniProtKB/TrEMBL
      A0A3B4C558
      Related
      ENSPNAP00000007012.1, ENSPNAT00000002558.2

    3. XM_037532285.1 → XP_037388182.1  receptor-type tyrosine-protein phosphatase gamma isoform X3

      Conserved Domains (4) summary
      smart00060
      Location:342 → 420
      FN3; Fibronectin type 3 domain
      cd03122
      Location:69 → 317
      alpha_CARP_receptor_like; Carbonic anhydrase alpha related protein, receptor_like subfamily. Carbonic anhydrase related proteins (CARPs) are sequence similar to carbonic anhydrases. Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon ...
      cd17667
      Location:823 → 1096
      R-PTPc-G-1; catalytic domain of receptor-type tyrosine-protein phosphatase G, repeat 1
      cd17670
      Location:1180 → 1384
      R-PTP-G-2; PTP-like domain of receptor-type tyrosine-protein phosphatase G, repeat 2
    Nucleotide Protein
    Heading Accession and Version

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