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    TRIM54 tripartite motif containing 54 [ Cebus imitator (Panamanian white-faced capuchin) ]

    Gene ID: 108315934, updated on 14-Mar-2024

    Summary

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    Gene symbol
    TRIM54
    Gene description
    tripartite motif containing 54
    See related
    Ensembl:ENSCCAG00000008830
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cebus imitator
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Cebus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    101 current Cebus_imitator-1.0 (GCF_001604975.1) Unplaced Scaffold NW_016107495.1 (1005961..1044526)

    NW_016107495.1Genomic Context describing neighboring genes Neighboring gene carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase Neighboring gene solute carrier family 30 member 3 Neighboring gene DnaJ heat shock protein family (Hsp40) member C5 gamma Neighboring gene mitochondrial inner membrane protein MPV17 Neighboring gene urocortin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_016107495 Unplaced Scaffold Reference Cebus_imitator-1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tripartite motif-containing protein 54

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cebus imitator Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cebus_imitator-1.0

    Genomic

    1. NW_016107495.1 Reference Cebus_imitator-1.0

      Range
      1005961..1044526
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037744631.1 → XP_037600559.1  tripartite motif-containing protein 54 isoform X2

      Conserved Domains (2) summary
      cd19833
      Location:69 → 111
      Bbox2_MuRF3_C-II; B-box-type 2 zinc finger found in muscle-specific RING finger protein 3 (MuRF-3) and similar proteins
      cl17238
      Location:2 → 27
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    2. XM_017545612.2 → XP_017401101.1  tripartite motif-containing protein 54 isoform X1

      UniProtKB/TrEMBL
      A0A2K5PCT5, A0A2K5PCU5
      Related
      ENSCCAP00000001434.1, ENSCCAT00000009799.1
      Conserved Domains (2) summary
      cd16761
      Location:24 → 82
      RING-HC_MuRF3; RING finger, HC subclass, found in muscle-specific RING finger protein 3 (MuRF-3) and similar proteins
      cd19833
      Location:124 → 166
      Bbox2_MuRF3_C-II; B-box-type 2 zinc finger found in muscle-specific RING finger protein 3 (MuRF-3) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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