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    LOC121322921 segment polarity protein dishevelled homolog DVL-3-like [ Polyodon spathula (Mississippi paddlefish) ]

    Gene ID: 121322921, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC121322921
    Gene description
    segment polarity protein dishevelled homolog DVL-3-like
    See related
    EnsemblRapid:ENSPAHG00005025160
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Polyodon spathula
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon
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    Genomic context

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    See LOC121322921 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current ASM1765450v1 (GCF_017654505.1) 11 NC_054544.1 (27718474..27758325, complement)

    Chromosome 11 - NC_054544.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121322570 Neighboring gene AP-2 complex subunit mu-like Neighboring gene multidrug resistance-associated protein 5-like Neighboring gene 60S ribosomal protein L35a-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_054544.1 Chromosome 11 Reference ASM1765450v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables frizzled binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    segment polarity protein dishevelled homolog DVL-3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Polyodon spathula Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1765450v1 Primary Assembly

    Genomic

    1. NC_054544.1 Reference ASM1765450v1 Primary Assembly

      Range
      27718474..27758325 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041263534.1 → XP_041119468.1  segment polarity protein dishevelled homolog DVL-3-like isoform X1

      Conserved Domains (3) summary
      smart00021
      Location:1 → 82
      DAX; Domain present in Dishevelled and axin
      cd00992
      Location:246 → 333
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd04438
      Location:431 → 514
      DEP_dishevelled; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in dishevelled-like proteins. Dishevelled-like proteins play a key role in the transduction of the Wnt signal from the cell surface to the nucleus, which in turn is an important regulatory pathway ...

    2. XM_041263537.1 → XP_041119471.1  segment polarity protein dishevelled homolog DVL-3-like isoform X4

      Related
      ENSPAHP00005033518.1, ENSPAHT00005037335.1
      Conserved Domains (3) summary
      smart00021
      Location:1 → 82
      DAX; Domain present in Dishevelled and axin
      cd00992
      Location:246 → 333
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd04438
      Location:412 → 495
      DEP_dishevelled; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in dishevelled-like proteins. Dishevelled-like proteins play a key role in the transduction of the Wnt signal from the cell surface to the nucleus, which in turn is an important regulatory pathway ...

    3. XM_041263535.1 → XP_041119469.1  segment polarity protein dishevelled homolog DVL-3-like isoform X2

      Related
      ENSPAHP00005033525.1, ENSPAHT00005037345.1
      Conserved Domains (3) summary
      smart00021
      Location:1 → 82
      DAX; Domain present in Dishevelled and axin
      cd00992
      Location:246 → 333
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd04438
      Location:424 → 507
      DEP_dishevelled; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in dishevelled-like proteins. Dishevelled-like proteins play a key role in the transduction of the Wnt signal from the cell surface to the nucleus, which in turn is an important regulatory pathway ...

    4. XM_041263536.1 → XP_041119470.1  segment polarity protein dishevelled homolog DVL-3-like isoform X3

      Conserved Domains (3) summary
      smart00021
      Location:1 → 82
      DAX; Domain present in Dishevelled and axin
      cd00992
      Location:246 → 333
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd04438
      Location:419 → 502
      DEP_dishevelled; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in dishevelled-like proteins. Dishevelled-like proteins play a key role in the transduction of the Wnt signal from the cell surface to the nucleus, which in turn is an important regulatory pathway ...
    Nucleotide Protein
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