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    PTPRN protein tyrosine phosphatase receptor type N [ Sceloporus undulatus (fence lizard) ]

    Gene ID: 121936648, updated on 22-Mar-2024

    Summary

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    Gene symbol
    PTPRN
    Gene description
    protein tyrosine phosphatase receptor type N
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sceloporus undulatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Phrynosomatidae; Phrynosomatinae; Sceloporus
    Orthologs
    human mouse all
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    Genomic context

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    See PTPRN in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    100 current SceUnd_v1.1 (GCF_019175285.1) 1 NC_056522.1 (251027339..251089467, complement)

    Chromosome 1 - NC_056522.1Genomic Context describing neighboring genes Neighboring gene dnaJ homolog subfamily B member 2-like Neighboring gene dnaJ homolog subfamily B member 2-like Neighboring gene aspartyl aminopeptidase Neighboring gene desmin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056522.1 Chromosome 1 Reference SceUnd_v1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in secretory granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    receptor-type tyrosine-protein phosphatase-like N

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sceloporus undulatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SceUnd_v1.1

    Genomic

    1. NC_056522.1 Reference SceUnd_v1.1

      Range
      251027339..251089467 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042479086.1 → XP_042335020.1  receptor-type tyrosine-protein phosphatase-like N isoform X1

      Conserved Domains (1) summary
      cd14609
      Location:665 → 966
      R-PTP-N; PTP-like domain of receptor-type tyrosine-protein phosphatase N

    2. XM_042479095.1 → XP_042335029.1  receptor-type tyrosine-protein phosphatase-like N isoform X2

      Conserved Domains (1) summary
      cd14609
      Location:665 → 945
      R-PTP-N; PTP-like domain of receptor-type tyrosine-protein phosphatase N
    Nucleotide Protein
    Heading Accession and Version

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