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    DDX46 DEAD-box helicase 46 [ Sceloporus undulatus (fence lizard) ]

    Gene ID: 121921478, updated on 22-Mar-2024

    Summary

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    Gene symbol
    DDX46
    Gene description
    DEAD-box helicase 46
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sceloporus undulatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Phrynosomatidae; Phrynosomatinae; Sceloporus
    Orthologs
    human mouse all
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    Genomic context

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    See DDX46 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    100 current SceUnd_v1.1 (GCF_019175285.1) 2 NC_056523.1 (98735270..98782098, complement)

    Chromosome 2 - NC_056523.1Genomic Context describing neighboring genes Neighboring gene thioredoxin domain containing 15 Neighboring gene chromosome 2 C5orf24 homolog Neighboring gene calcium modulating ligand Neighboring gene SEC24 homolog A, COPII coat complex component

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056523.1 Chromosome 2 Reference SceUnd_v1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable ATP-dependent RNA helicase DDX46

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sceloporus undulatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SceUnd_v1.1

    Genomic

    1. NC_056523.1 Reference SceUnd_v1.1

      Range
      98735270..98782098 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042449623.1 → XP_042305557.1  probable ATP-dependent RNA helicase DDX46 isoform X2

      Conserved Domains (2) summary
      COG0513
      Location:354 → 836
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd17953
      Location:371 → 592
      DEADc_DDX46; DEAD-box helicase domain of DEAD box protein 46

    2. XM_042449622.1 → XP_042305556.1  probable ATP-dependent RNA helicase DDX46 isoform X1

      Conserved Domains (2) summary
      COG0513
      Location:354 → 836
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd17953
      Location:371 → 592
      DEADc_DDX46; DEAD-box helicase domain of DEAD box protein 46

    3. XM_042449624.1 → XP_042305558.1  probable ATP-dependent RNA helicase DDX46 isoform X3

      Conserved Domains (2) summary
      COG0513
      Location:343 → 825
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd17953
      Location:360 → 581
      DEADc_DDX46; DEAD-box helicase domain of DEAD box protein 46
    Nucleotide Protein
    Heading Accession and Version

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