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    SNAP29 synaptosome associated protein 29 [ Tyto alba (common barn owl) ]

    Gene ID: 104364461, updated on 26-Nov-2024

    Summary

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    Gene symbol
    SNAP29
    Gene description
    synaptosome associated protein 29
    Locus tag
    N341_04794
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tyto alba
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
    Orthologs
    human mouse all
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    Genomic context

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    See SNAP29 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881320.1 (10723078..10733096)
    101 previous assembly genome_assembly_l500 (GCF_902150015.1) Unplaced Scaffold NW_022678682.1 (209264..219269, complement)

    NW_024881320.1Genomic Context describing neighboring genes Neighboring gene HIC ZBTB transcriptional repressor 2 Neighboring gene phosphatidylinositol 4-kinase alpha Neighboring gene serpin family D member 1 Neighboring gene uncharacterized LOC116965385 Neighboring gene clathrin heavy chain like 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle fusion to presynaptic active zone membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle priming IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptosomal-associated protein 29
    Names
    Synaptosomal-associated protein 29

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T.alba_DEE_v4.0

    Genomic

    1. NW_024881320.1 Reference T.alba_DEE_v4.0

      Range
      10723078..10733096
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033008353.2 → XP_032864244.2  synaptosomal-associated protein 29

      Conserved Domains (2) summary
      cd15856
      Location:197 → 255
      SNARE_SNAP29C; C-terminal SNARE motif of SNAP29
      cd15887
      Location:43 → 107
      SNARE_SNAP29N; N-terminal SNARE motif of SNAP29

    2. XM_033008352.2 → XP_032864243.2  synaptosomal-associated protein 29

      Conserved Domains (2) summary
      cd15856
      Location:197 → 255
      SNARE_SNAP29C; C-terminal SNARE motif of SNAP29
      cd15887
      Location:43 → 107
      SNARE_SNAP29N; N-terminal SNARE motif of SNAP29
    Nucleotide Protein
    Heading Accession and Version

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