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    LOC119860935 small ubiquitin-related modifier 3 [ Dermochelys coriacea (leatherback sea turtle) ]

    Gene ID: 119860935, updated on 8-May-2024

    Summary

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    Gene symbol
    LOC119860935
    Gene description
    small ubiquitin-related modifier 3
    See related
    EnsemblRapid:ENSDCOG00030008249
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dermochelys coriacea
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
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    Genomic context

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    See LOC119860935 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current rDerCor1.pri.v4 (GCF_009764565.3) 9 NC_050076.1 (51521945..51552180)
    100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 9 NC_050076.1 (51521945..51552180)

    Chromosome 9 - NC_050076.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122455651 Neighboring gene uncharacterized LOC122455650 Neighboring gene PTTG1 interacting protein Neighboring gene ubiquitin conjugating enzyme E2 G2 Neighboring gene thrombospondin type laminin G domain and EAR repeats

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tag activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-like protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein sumoylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    small ubiquitin-related modifier 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rDerCor1.pri.v4

    Genomic

    1. NC_050076.1 Reference rDerCor1.pri.v4

      Range
      51521945..51552180
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038415137.1 → XP_038271065.1  small ubiquitin-related modifier 3 isoform X2

      Related
      ENSDCOP00030022891.1, ENSDCOT00030024094.1
      Conserved Domains (1) summary
      cd16115
      Location:16 → 87
      Ubl_SUMO2_3_4; ubiquitin-like (Ubl) domain found in small ubiquitin-related modifier SUMO-2, SUMO-3, SUMO-4, and similar proteins

    2. XM_043491695.1 → XP_043347630.1  small ubiquitin-related modifier 3 isoform X1

      Conserved Domains (1) summary
      cd16115
      Location:77 → 148
      Ubl_SUMO2_3_4; ubiquitin-like (Ubl) domain found in small ubiquitin-related modifier SUMO-2, SUMO-3, SUMO-4, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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