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    COPS2 COP9 signalosome subunit 2 [ Gallus gallus (chicken) ]

    Gene ID: 430917, updated on 17-Aug-2024

    Summary

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    Symbol
    COPS2provided by CGNC
    Full Name
    COP9 signalosome subunit 2provided by CGNC
    Primary source
    CGNC:2450
    See related
    Ensembl:ENSGALG00010016027
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 10 NC_052541.1 (10456628..10477873, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 10 NC_052582.1 (10329604..10350837, complement)

    Chromosome 10 - NC_052541.1Genomic Context describing neighboring genes Neighboring gene SHC adaptor protein 4 Neighboring gene proline-rich protein 2-like Neighboring gene SECIS binding protein 2 like Neighboring gene galactokinase 2 Neighboring gene family with sequence similarity 227 member B Neighboring gene uncharacterized LOC107054189

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deneddylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of COP9 signalosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    COP9 signalosome complex subunit 2
    Names
    COP9 constitutive photomorphogenic homolog subunit 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031596.2 → NP_001026767.2  COP9 signalosome complex subunit 2

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000245
      UniProtKB/TrEMBL
      E1C3U6, Q5ZI80
      Related
      ENSGALP00010022345.1, ENSGALT00010038619.1
      Conserved Domains (2) summary
      COG5159
      Location:40 → 434
      RPN6; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
      pfam01399
      Location:309 → 413
      PCI; PCI domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052541.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      10456628..10477873 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015292009.4 → XP_015147495.1  COP9 signalosome complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      Q5ZI80
      Related
      ENSGALP00010022329.1, ENSGALT00010038591.1
      Conserved Domains (2) summary
      COG5159
      Location:40 → 441
      RPN6; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
      pfam01399
      Location:316 → 420
      PCI; PCI domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052582.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      10329604..10350837 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046924989.1 → XP_046780945.1  COP9 signalosome complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      Q5ZI80
    Nucleotide Protein Strain
    Heading Accession and Version

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