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    LOC6577016 lactosylceramide 4-alpha-galactosyltransferase [ Drosophila mojavensis ]

    Gene ID: 6577016, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6577016
    Gene description
    lactosylceramide 4-alpha-galactosyltransferase
    Locus tag
    Dmoj_GI17680
    See related
    EnsemblRapid:LOC6577016
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila mojavensis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Also known as
    GI17680; GI17680-PA; GI17680-PB; GI17680-PC
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6577016 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current ASM1815372v1 (GCF_018153725.1) Unplaced Scaffold NW_025318858.1 (16768915..16771740)
    101 previous assembly dmoj_caf1 (GCF_000005175.2) Unplaced Scaffold NW_001979113.1 (16715578..16718335)

    NW_025318858.1Genomic Context describing neighboring genes Neighboring gene histone H1 Neighboring gene histone H3 Neighboring gene uncharacterized LOC6577017 Neighboring gene coiled-coil domain-containing protein 85

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-1,4-N-acetylgalactosaminyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycosphingolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lactosylceramide 4-alpha-galactosyltransferase
    Names
    Dmoj\GI17680
    Dmoj\GI17680-PA
    Dmoj\GI17680-PB
    Dmoj\GI17680-PC
    dmoj_GLEANR_2478

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila mojavensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815372v1

    Genomic

    1. NW_025318858.1 Reference ASM1815372v1

      Range
      16768915..16771740
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044008827.1 → XP_043864762.1  lactosylceramide 4-alpha-galactosyltransferase

      UniProtKB/TrEMBL
      A0A0Q9XCC8, B4KIS8
      Related
      XP_043864762.1, XM_044008827.1
      Conserved Domains (2) summary
      pfam04572
      Location:265 → 391
      Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
      cl19952
      Location:117 → 243
      Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif

    2. XM_032729476.2 → XP_032585367.1  lactosylceramide 4-alpha-galactosyltransferase

      UniProtKB/TrEMBL
      A0A0Q9XCC8, B4KIS8
      Related
      XP_032585367.1, XM_032729476.2
      Conserved Domains (2) summary
      pfam04572
      Location:265 → 391
      Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
      cl19952
      Location:117 → 243
      Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif

    RNA

    1. XR_004364045.2 RNA Sequence

      Related
      XR_004364045.2
    Nucleotide Protein
    Heading Accession and Version

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