U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    TRIM54 tripartite motif containing 54 [ Neogale vison (American mink) ]

    Gene ID: 122915483, updated on 22-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TRIM54
    Gene description
    tripartite motif containing 54
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Neogale vison
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Neogale
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 8
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current ASM_NN_V1 (GCF_020171115.1) 8 NC_058098.1 (122976608..122997773, complement)

    Chromosome 8 - NC_058098.1Genomic Context describing neighboring genes Neighboring gene mitochondrial inner membrane protein MPV17 Neighboring gene urocortin Neighboring gene DnaJ heat shock protein family (Hsp40) member C5 gamma Neighboring gene solute carrier family 30 member 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_058098.1 Chromosome 8 Reference ASM_NN_V1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tripartite motif-containing protein 54

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Neovison vison Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM_NN_V1 Primary Assembly

    Genomic

    1. NC_058098.1 Reference ASM_NN_V1 Primary Assembly

      Range
      122976608..122997773 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044262248.1 → XP_044118183.1  tripartite motif-containing protein 54

      UniProtKB/TrEMBL
      A0A8C7BNY5
      Conserved Domains (3) summary
      smart00502
      Location:170 → 273
      BBC; B-Box C-terminal domain
      cd16761
      Location:24 → 82
      RING-HC_MuRF3; RING finger, HC subclass, found in muscle-specific RING finger protein 3 (MuRF-3) and similar proteins
      cd19833
      Location:124 → 166
      Bbox2_MuRF3_C-II; B-box-type 2 zinc finger found in muscle-specific RING finger protein 3 (MuRF-3) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.