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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ASM1607732v2
Genomic
-
NC_052188.1 Reference ASM1607732v2
- Range
-
37722785..37787086
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_014858104.2 → XP_014713590.1 plectin isoform X22
- UniProtKB/TrEMBL
-
A0A8C4PLH5
- Conserved Domains (5) summary
-
- cd01439
Location:840 → 959
- TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
- cd12547
Location:16 → 85
- RRM1_2_PAR10; RNA recognition motif 1 and 2 in poly [ADP-ribose] polymerase 10 (PARP-10) and similar proteins
- pfam00644
Location:774 → 959
- PARP; Poly(ADP-ribose) polymerase catalytic domain
- pfam11107
Location:36 → 265
- FANCF; Fanconi anemia group F protein (FANCF)
- cl17169
Location:200 → 248
- RRM_SF; RNA recognition motif (RRM) superfamily
-
XM_044780957.1 → XP_044636892.1 plectin isoform X1
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Conserved Domains (5) summary
-
- PTZ00121
Location:2186 → 2892
- PTZ00121; MAEBL; Provisional
- smart00250
Location:5150 → 5187
- PLEC; Plectin repeat
- COG5069
Location:873 → 1211
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:1459 → 1637
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:1805 → 2429
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_044780958.1 → XP_044636893.1 plectin isoform X2
- UniProtKB/TrEMBL
- A0A9L0ICP5, A0A9L0JJ02
- Related
- ENSEASP00005038652.1, ENSEAST00005040821.1
- Conserved Domains (5) summary
-
- PTZ00121
Location:2181 → 2887
- PTZ00121; MAEBL; Provisional
- smart00250
Location:5145 → 5182
- PLEC; Plectin repeat
- COG5069
Location:873 → 1206
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:1454 → 1632
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:1800 → 2424
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_044780959.1 → XP_044636894.1 plectin isoform X3
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Conserved Domains (5) summary
-
- PTZ00121
Location:2101 → 2807
- PTZ00121; MAEBL; Provisional
- smart00250
Location:5065 → 5102
- PLEC; Plectin repeat
- COG5069
Location:788 → 1126
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:1374 → 1552
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:1720 → 2344
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_044780960.1 → XP_044636895.1 plectin isoform X4
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Conserved Domains (6) summary
-
- PTZ00121
Location:2068 → 2774
- PTZ00121; MAEBL; Provisional
- smart00250
Location:5032 → 5069
- PLEC; Plectin repeat
- COG1196
Location:2408 → 3199
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5069
Location:755 → 1093
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:1341 → 1519
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:1687 → 2311
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_014858060.2 → XP_014713546.2 plectin isoform X11
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Related
- ENSEASP00005049982.1, ENSEAST00005065889.1
- Conserved Domains (5) summary
-
- PTZ00121
Location:1377 → 2083
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4341 → 4378
- PLEC; Plectin repeat
- COG5069
Location:64 → 402
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:650 → 828
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:996 → 1620
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_014858062.2 → XP_014713548.2 plectin isoform X11
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Related
- ENSEASP00005013951.2, ENSEAST00005015145.2
- Conserved Domains (5) summary
-
- PTZ00121
Location:1377 → 2083
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4341 → 4378
- PLEC; Plectin repeat
- COG5069
Location:64 → 402
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:650 → 828
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:996 → 1620
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_044780963.1 → XP_044636898.1 plectin isoform X18
- UniProtKB/TrEMBL
- A0A9L0JDZ9, A0A9L0JJ02
- Related
- ENSEASP00005051424.1, ENSEAST00005057503.1
- Conserved Domains (6) summary
-
- PTZ00121
Location:1341 → 2047
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4305 → 4342
- PLEC; Plectin repeat
- COG1196
Location:1681 → 2472
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5069
Location:33 → 366
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:614 → 792
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:960 → 1584
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_044780964.1 → XP_044636899.1 plectin isoform X19
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Conserved Domains (6) summary
-
- PTZ00121
Location:1336 → 2042
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4300 → 4337
- PLEC; Plectin repeat
- COG1196
Location:1676 → 2467
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5069
Location:33 → 361
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:609 → 787
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:955 → 1579
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_014858068.2 → XP_014713554.2 plectin isoform X9
- UniProtKB/TrEMBL
-
A0A9L0I9X8
- Related
- ENSEASP00005036936.1, ENSEAST00005077086.1
- Conserved Domains (6) summary
-
- PTZ00121
Location:1392 → 2098
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4356 → 4393
- PLEC; Plectin repeat
- COG1196
Location:1732 → 2523
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5069
Location:84 → 417
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:665 → 843
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:1011 → 1635
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_014858070.2 → XP_014713556.2 plectin isoform X10
- UniProtKB/TrEMBL
-
A0A9L0I9X8
- Conserved Domains (6) summary
-
- PTZ00121
Location:1387 → 2093
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4351 → 4388
- PLEC; Plectin repeat
- COG1196
Location:1727 → 2518
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5069
Location:84 → 412
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:660 → 838
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:1006 → 1630
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_014858058.2 → XP_014713544.2 plectin isoform X7
- UniProtKB/TrEMBL
- A0A9L0JJ02, A0A9L0JM36
- Related
- ENSEASP00005053448.1, ENSEAST00005049152.1
- Conserved Domains (7) summary
-
- PTZ00121
Location:1492 → 2198
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4456 → 4493
- PLEC; Plectin repeat
- COG1196
Location:1832 → 2623
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5069
Location:184 → 517
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:765 → 943
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:1111 → 1735
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl02102
Location:5 → 114
- S10_plectin; Plectin/S10 domain
-
XM_014858059.2 → XP_014713545.2 plectin isoform X8
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Conserved Domains (7) summary
-
- PTZ00121
Location:1487 → 2193
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4451 → 4488
- PLEC; Plectin repeat
- COG1196
Location:1827 → 2618
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5069
Location:184 → 512
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:760 → 938
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:1106 → 1730
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl02102
Location:5 → 114
- S10_plectin; Plectin/S10 domain
-
XM_014858069.2 → XP_014713555.2 plectin isoform X12
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Conserved Domains (6) summary
-
- PTZ00121
Location:1327 → 2033
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4291 → 4328
- PLEC; Plectin repeat
- COG1196
Location:1667 → 2458
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5069
Location:19 → 352
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:600 → 778
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:946 → 1570
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_014858071.2 → XP_014713557.2 plectin isoform X13
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Conserved Domains (6) summary
-
- PTZ00121
Location:1322 → 2028
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4286 → 4323
- PLEC; Plectin repeat
- COG1196
Location:1662 → 2453
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5069
Location:19 → 347
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:595 → 773
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:941 → 1565
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_014858072.2 → XP_014713558.2 plectin isoform X20
- UniProtKB/TrEMBL
- A0A9L0JJ02, A0A9L0JZF7
- Related
- ENSEASP00005058514.1, ENSEAST00005055220.1
- Conserved Domains (6) summary
-
- PTZ00121
Location:1318 → 2024
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4282 → 4319
- PLEC; Plectin repeat
- COG1196
Location:1658 → 2449
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5069
Location:10 → 343
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:591 → 769
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:937 → 1561
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_014858073.2 → XP_014713559.2 plectin isoform X21
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Conserved Domains (6) summary
-
- PTZ00121
Location:1313 → 2019
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4277 → 4314
- PLEC; Plectin repeat
- COG1196
Location:1653 → 2444
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5069
Location:10 → 338
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:586 → 764
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:932 → 1556
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_014858065.2 → XP_014713551.2 plectin isoform X14
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Related
- ENSEASP00005036403.1, ENSEAST00005051878.1
- Conserved Domains (5) summary
-
- PTZ00121
Location:1350 → 2056
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4314 → 4351
- PLEC; Plectin repeat
- COG5069
Location:36 → 375
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:623 → 801
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:969 → 1593
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_014858067.2 → XP_014713553.2 plectin isoform X17
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Conserved Domains (5) summary
-
- PTZ00121
Location:1345 → 2051
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4309 → 4346
- PLEC; Plectin repeat
- COG5069
Location:36 → 370
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:618 → 796
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:964 → 1588
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_044780961.1 → XP_044636896.1 plectin isoform X5
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Conserved Domains (5) summary
-
- PTZ00121
Location:1359 → 2065
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4323 → 4360
- PLEC; Plectin repeat
- COG5069
Location:51 → 384
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:632 → 810
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:978 → 1602
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_044780962.1 → XP_044636897.1 plectin isoform X6
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Related
- ENSEASP00005013959.2, ENSEAST00005015156.2
- Conserved Domains (5) summary
-
- PTZ00121
Location:1354 → 2060
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4318 → 4355
- PLEC; Plectin repeat
- COG5069
Location:51 → 379
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:627 → 805
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:973 → 1597
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_014858064.2 → XP_014713550.2 plectin isoform X15
- UniProtKB/TrEMBL
- A0A9L0I6A7, A0A9L0JJ02
- Related
- ENSEASP00005035196.1, ENSEAST00005042568.1
- Conserved Domains (6) summary
-
- PTZ00121
Location:1350 → 2056
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4314 → 4351
- PLEC; Plectin repeat
- COG1196
Location:1690 → 2481
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5069
Location:42 → 375
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:623 → 801
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:969 → 1593
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
XM_014858066.2 → XP_014713552.2 plectin isoform X16
- UniProtKB/TrEMBL
-
A0A9L0JJ02
- Conserved Domains (6) summary
-
- PTZ00121
Location:1345 → 2051
- PTZ00121; MAEBL; Provisional
- smart00250
Location:4309 → 4346
- PLEC; Plectin repeat
- COG1196
Location:1685 → 2476
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5069
Location:42 → 370
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:618 → 796
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- TIGR02168
Location:964 → 1588
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type